Gene Hoch_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3486 
Symbol 
ID8545875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4812212 
End bp4812691 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content68% 
IMG OID646388154 
ProductThioredoxin domain protein 
Protein accessionYP_003267881 
Protein GI262196672 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.665282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG CCATTGCCAG TGTGTTCCTC GGCCTCTGCG TCGCCGCGTG CGGCGGCTCC 
TCGCCGGAGC CCGCCGAGCC GGCCCATCCT GTAGAGCCGG GCGCGGCCGA TGACGCCGCC
GCGATCGAGC CGGTCGCGCC GCAGTTCGAG CTCAGCAATC CCGCAGGCGA TCTCGTCGCG
GTCGAGGATG TGCTGGTCCC CGGCCAGGTC ACGGTGGTCG ATTTCTACGC CGACTGGTGT
GCCCCCTGCA AAGTGTTGGA GAAGAAGCTG GCCGGTGAGA TCCACCAGGA GCCGCGCATC
TCGGTGCGCA AAATCGATGT CGGCCAGGCC GAGCCCGAGG CCGTGACCGC TCAATATGGG
ATCGAAAATC TCCCTCACGT GCGCATCTAC GATCCCGAGG GCAAGCTGCT GCACGATCTG
CCCGGTACCG CTGCGGAGCG CACCGGCGCG TTGGCACTCG AGGCGCTCGG CGACCTTTGA
 
Protein sequence
MRIAIASVFL GLCVAACGGS SPEPAEPAHP VEPGAADDAA AIEPVAPQFE LSNPAGDLVA 
VEDVLVPGQV TVVDFYADWC APCKVLEKKL AGEIHQEPRI SVRKIDVGQA EPEAVTAQYG
IENLPHVRIY DPEGKLLHDL PGTAAERTGA LALEALGDL