Gene Hoch_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3449 
Symbol 
ID8545838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4761396 
End bp4761764 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content72% 
IMG OID646388117 
Productprotein of unknown function UPF0016 
Protein accessionYP_003267844 
Protein GI262196635 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0236058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGA AGCTCTTTGC CACCACCTTT GCCGCTATCT TCCTCGCGGA GTTGGGCGAC 
AAGACCCAGC TCGCGACCCT GTCGCTATCG GCCGGCGGCT CCTCGCGCTG GGTGGTGTTC
GCGGGTTCGG CGTTGGCCCT GGTGGCCACC TCCGCCATCG CTGTGCTCGT CGGCGACGCG
CTCACGCGCG TGGTGCCGCC CATCTGGATC CGGCGCACGG CCGGTGCGCT CTTCGTCGTG
CTCGGTGTCG TGTTCCTGCT CAGTGGCGGC GGTGGTGACG CCGGAGAGTC CGCCACCCCG
GATAGCGCGA GCAGCGCGAC CAGCGCCGCC CCGCCGAGCG GTGGCCCGGG CGCGCCCGCG
GCGACCTGA
 
Protein sequence
MDWKLFATTF AAIFLAELGD KTQLATLSLS AGGSSRWVVF AGSALALVAT SAIAVLVGDA 
LTRVVPPIWI RRTAGALFVV LGVVFLLSGG GGDAGESATP DSASSATSAA PPSGGPGAPA
AT