| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3442 |
|---|
| Symbol | |
|---|
| ID | 8545830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4754655 |
|---|
| End bp | 4755395 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646388109 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003267837 |
|---|
| Protein GI | 262196628 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.123967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0228809 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCC TGCGCGACGT ACACAAAGGC TTTGCCGGCA AACCGGTATT GCGCGGCATC
GACCTCGAGG TCGCGCGCGG CAAGACCCTG GGCATCATCG GCCCGGCGGC CAGCGGCAAG
AGCGTGCTGC TCAAGCTGGT GTGCGGCCTG CTCCCGGCCG ATCGCGGCAC CATCACGGTC
GCCGACTGCG AGCTGGGCAC GGCCGACGAC GACGCGCTGG CGGCCCTGCA CCGGCGCATC
GGCATGCTGT TTCAACACAG CGCCCTGTTC GACTTCCTGA GCGTGCACGA GAACGTCGCC
TTCCCCCTCG AGCGCCGCGG CCAGCTCGAC AGCGACGAGA TCACCCGCCA AGTCGAGACC
CGCCTGCGCC AGCTCGGCCT CGCCGGCAGC GGCGCGCTGG CCCCGTCCGA GCTCTCGGGC
GGCATGAAAA AGCGCGTGGC CCTGGCCCGG GCCACGGTCG CGCGTCCCGA GATCGTGGTC
TACGACGAGC CCACCGCCGG GCTCGACCCG GTGACCACCT CGAAGGTCTA CGATCTGCTG
CGCTCCGAGC GCGAACACAC CGGCGCCACC GTGCTGCTCG TGTCCTCGGA CGTGGCCGCG
CTGCTCGAGT TCGCCGACGA CATCGCCATG CTGCTCGATG GCCGCATCCA CTATTGCGGA
CCGGCCGCGT CGGTGGCCGA GGCCGAGGAT CCCACCCTAC GCCAGTTCGT GCGCGGCGAG
CTGCGGGGGC CGCTGTCGTG A
|
|---|
| Protein sequence | MIRLRDVHKG FAGKPVLRGI DLEVARGKTL GIIGPAASGK SVLLKLVCGL LPADRGTITV
ADCELGTADD DALAALHRRI GMLFQHSALF DFLSVHENVA FPLERRGQLD SDEITRQVET
RLRQLGLAGS GALAPSELSG GMKKRVALAR ATVARPEIVV YDEPTAGLDP VTTSKVYDLL
RSEREHTGAT VLLVSSDVAA LLEFADDIAM LLDGRIHYCG PAASVAEAED PTLRQFVRGE
LRGPLS
|
|---|
| |