Gene Hoch_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3341 
Symbol 
ID8545729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4622997 
End bp4623617 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content70% 
IMG OID646388008 
Productmicrocompartments protein 
Protein accessionYP_003267736 
Protein GI262196527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00179128 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.644151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGC GCGCATACAC GGTCCTCGAC GCTCTTCAAC CGCAGCTCGT GGCTTTCCTG 
CAGACGGTGA GCACGGGCTT CATGCCGATG GAGCAGCAGG CCTCGGTGCT GGTCGAGATC
GCGCCCGGCA TCGCGGTCAA CCAGCTCACC GACGCCGCGC TCAAGGCCAC GCGCTGCCAA
CCCGGTCTGC AGATCGTCGA GCGCGCCTAC GGGCTCATCG AGATGCACGA TGATGACCAG
GGTCAGGTGC GGGCCGCGGG CGACGCCATG CTGGCGCATC TGGGCGCGCG CGAAGCCGAT
CGCCTGGCGC CGCGCGTGGT GTCCTCGCAG ATCATCACCG GCATCGACGG TCACCAGTCG
CAGCTCATCA ACCGCATGCG CCACGGCGAC ATGATCCAGG CCGGTCAGAC CCTGTACATC
CTCGAGGTCC ACCCCGCCGG CTACGCCGCG CTGGCCGCCA ACGAGGCCGA GAAGGCGGCG
CCCATCAAGC TGCTCGAGGT GGTGACCTTC GGCGCCTTTG GCCGGCTCTG GCTGGGCGGG
GGCGAGGCCG AGATCGCCGA GGCTGCGCGC GCGGCCGAGG GCGCGCTGGC CGGCCTCAGC
GGTCGAGACA ACCGCGGGTG A
 
Protein sequence
MELRAYTVLD ALQPQLVAFL QTVSTGFMPM EQQASVLVEI APGIAVNQLT DAALKATRCQ 
PGLQIVERAY GLIEMHDDDQ GQVRAAGDAM LAHLGAREAD RLAPRVVSSQ IITGIDGHQS
QLINRMRHGD MIQAGQTLYI LEVHPAGYAA LAANEAEKAA PIKLLEVVTF GAFGRLWLGG
GEAEIAEAAR AAEGALAGLS GRDNRG