| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3307 |
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| Symbol | |
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| ID | 8545695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4561148 |
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| End bp | 4562167 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387974 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003267702 |
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| Protein GI | 262196493 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.185146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.246163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACCC GCAAGATCGA GCTACGAGTC GGCATCCTCA TCGCGGTCGC CGTGATCACC
TTGGTGGGCT TCATCATCGT GCTCGGCAAC TTCGCGTTTG GCGGTGGCTA CACCCTGTAC
GTCGACCTCG AGTTCAGCGG CAACATCCAG ATGGGCGCGC CCGTGCGCAT CTCGGGCATC
AAGATGGGCC GCGTGAGCAG CGTGGACTTC TGGGGCGGCA AGATCGACGA GTCCCAGGGC
CGGCGCGTGC AGGTGCGCCT GGAGGTGTGG CTCAAGGACG ACGCCCGCGA GGCCGTGCGC
CAGGACGCCG AGTTCTACAT CAACACCCAG GGCGTGCTGG GCGAGCAGTA CCTCGAGATC
GTGCCCGGCC GCGACTACCA GTCACCGCCG CTGGCGCCCG GGACCATCGT GCTCGGCAAC
AGCCCGCCGC GCATGGATCT GCTGCTCTCG CGCCTGTACA CCGTGCTCGA GTCGGTGTCC
GAGGTGCTCG ACGAGGAGCG CGAGGTGCTG CGCGAGCTGT TGCACAACAG CGCCAGCGCG
GTCGCCGAGG TCAACCGCCA GCTCGTGGAC AACCGCGACA CCATCTCGCA GCTCCTGGTG
GGCGCCAACG AGCTCACGCG CGAGGCCACC GCCACCCTCG GCCGCGTCAA CGAGGGCCTC
GGCGACCCGC GCATCATCGG CAAGACCGTG CGCGACGCCG ACGCCTTGCT GGTCACGGCC
AATCGCTCGC TCGACACCCT CACGCCGTCG ATCGACCGCT TCCTGGGCGA CGCCACCCGC
GCCACCGGCC TGCTCACCGA GGAGCGCGTC GACCGCGCCA TCGCCGTGGT CGACAAAGCC
GCGAGCGCGG CCACCAAGGC CGGCGGGCTC ATCGACAACG TCGACGGCCT GGTCACCGAC
CTGCGCAGCG GCAAAGGCAC GGCCGGCGCC CTGCTCGTCC GCGAGGACAT CTACGCCGAC
CTGCGCGAGC TTCTGCGCGA CCTCAACCGC AACCCCTGGA AGCTGTTCTG GAAGGAGTAG
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| Protein sequence | MGTRKIELRV GILIAVAVIT LVGFIIVLGN FAFGGGYTLY VDLEFSGNIQ MGAPVRISGI
KMGRVSSVDF WGGKIDESQG RRVQVRLEVW LKDDAREAVR QDAEFYINTQ GVLGEQYLEI
VPGRDYQSPP LAPGTIVLGN SPPRMDLLLS RLYTVLESVS EVLDEEREVL RELLHNSASA
VAEVNRQLVD NRDTISQLLV GANELTREAT ATLGRVNEGL GDPRIIGKTV RDADALLVTA
NRSLDTLTPS IDRFLGDATR ATGLLTEERV DRAIAVVDKA ASAATKAGGL IDNVDGLVTD
LRSGKGTAGA LLVREDIYAD LRELLRDLNR NPWKLFWKE
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