Gene Hoch_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3271 
Symbol 
ID8545659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4507827 
End bp4508222 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content67% 
IMG OID646387938 
Producttype IV pilus assembly PilZ 
Protein accessionYP_003267666 
Protein GI262196457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00733908 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCCGGCC AGTCCAGAGA GTTCCCCCGT TACGCCGCCG AGGCCAACGT GGAGATGACG 
GCGCCGACGT TCACCACCTC CGGGCGGACG TCGAATGTGT CGCGTGGCGG CTTGGCCGCG
ACCGTACCGC GGGCGATGCC GCCCGGTGAG AACATCACCG TACGCCTGTC CCTGGTGTTC
GACGAGGACA CCTTCTCCGA GCCGCTGGAT CTGCCCGCGC GCGTGGTCTG GTGCACGCAG
CTCGACGACA AGTACCAGCT CGGCATCGCG CTCCTGCCGC TCAGCTCGGA TCAGCGCACC
TACTTCGACA TGTTCCTGCG CTACCTGGAA GAAGGTCTGG CCCACAGCCG GGCCAAGCGG
CGCGGCGAGC GCGACGACGC CGACTTCTTT AGCTGA
 
Protein sequence
MSGQSREFPR YAAEANVEMT APTFTTSGRT SNVSRGGLAA TVPRAMPPGE NITVRLSLVF 
DEDTFSEPLD LPARVVWCTQ LDDKYQLGIA LLPLSSDQRT YFDMFLRYLE EGLAHSRAKR
RGERDDADFF S