Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3271 |
Symbol | |
ID | 8545659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4507827 |
End bp | 4508222 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646387938 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_003267666 |
Protein GI | 262196457 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00733908 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCGGCC AGTCCAGAGA GTTCCCCCGT TACGCCGCCG AGGCCAACGT GGAGATGACG GCGCCGACGT TCACCACCTC CGGGCGGACG TCGAATGTGT CGCGTGGCGG CTTGGCCGCG ACCGTACCGC GGGCGATGCC GCCCGGTGAG AACATCACCG TACGCCTGTC CCTGGTGTTC GACGAGGACA CCTTCTCCGA GCCGCTGGAT CTGCCCGCGC GCGTGGTCTG GTGCACGCAG CTCGACGACA AGTACCAGCT CGGCATCGCG CTCCTGCCGC TCAGCTCGGA TCAGCGCACC TACTTCGACA TGTTCCTGCG CTACCTGGAA GAAGGTCTGG CCCACAGCCG GGCCAAGCGG CGCGGCGAGC GCGACGACGC CGACTTCTTT AGCTGA
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Protein sequence | MSGQSREFPR YAAEANVEMT APTFTTSGRT SNVSRGGLAA TVPRAMPPGE NITVRLSLVF DEDTFSEPLD LPARVVWCTQ LDDKYQLGIA LLPLSSDQRT YFDMFLRYLE EGLAHSRAKR RGERDDADFF S
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