4 homologs were found in PanDaTox collection
for query gene Hoch_3271 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_3271  type IV pilus assembly PilZ  100 
 
 
131 aa  269  7e-72  Haliangium ochraceum DSM 14365  Bacteria  normal  decreased coverage  0.00733908 
 
 
-
 
NC_010524  Lcho_1910  type IV pilus assembly PilZ  33.33 
 
 
143 aa  50.1  0.000009  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.060873 
 
 
-
 
NC_008826  Mpe_B0017  hypothetical protein  30 
 
 
143 aa  46.2  0.0002  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00491094 
 
 
-
 
NC_009439  Pmen_2551  type IV pilus assembly PilZ  25.84 
 
 
137 aa  40.8  0.006  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.000598671  hitchhiker  0.000000000277094 
 
 
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