| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3266 |
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| Symbol | |
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| ID | 8545654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4502842 |
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| End bp | 4503822 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646387933 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003267661 |
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| Protein GI | 262196452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0214186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCTTCG GCAAATATCA CGGCCTGGGC AACGACTTCC TGGTCGTTGA CCTACGCGAC
CCAGAGGTCG CGGCCGGCAC CGGACACGCG GGCGAAGTCC CCTCTCCGGC CGTGGTGCGG
GCGCTGTGCG AGCGCCGCTT CGGCATCGGC GCCGACGGCA TCATGGCCGT CCTGCCCGCC
CTGGGCGACG GCGACGCTCG CCTGCGCGTG CTCAACAGCG ACGGCAGCGA GGCCGAGATG
TGCGGCAACG GCCTGCGCTG CGTGGTCAAG TACCTGGGCG AGCGCGACCC GGCGCTGCGC
GGCCGCGAAA CCCTGAACAT CGAGACCGGC GCCGGCCTGC TGCGCTGCCG CGCGCACCGC
TCGGACACCG CGCTCGGCGA CGGCGGGATC GCGGCCATCG AGCAGGTCAC CGTGGACATG
GGCCGGCCGC GCCTCGAGCG CGCCCAGATC CCCATGCACG GCCCGGCCGA AGAGCGCTGC
ATCTCGGAGC CGCTGGCCAT CGCCGGCCGC CCCCTCGACA TCACCGCGGT GTCCATGGGC
AACCCGCACG CGATCGCGTT CGTCGATGTC CACGGCGCCG AGCAGCGCGC GCTGGCCGAG
CTGATCGGAC CCAGCCTCGA GCGCCACCCC TGGTTTCCGC GCCACACCAA CGTCGAGCTG
GCCCACCTGC GGCGCGCGCC CCAGAGCGCC GCCGACGACG ACGGCGACAG CGCGGACAGC
CCCACGGTCA TCGAGCTCGT GGTCTGGGAG CGCGGCTGCG GCATCACGCT GGCGTGCGGC
ACCGGCGCCT GCGCCACCGC GGTGGCCGCG TGCCTCACCG GCCGCGCGCG CCCGGGCGAG
GCCATCACCG TGCACCTGCT CGGCGGCCCG CTCGCGATCA CGGTCGGCGC CGAGCTCGAC
TCGGTGCGCA TGCGCGGCCC GGCCACGCAC GTGTTCGACG GCGTGGTCCC GGCGTCGCTG
TTGCGCGCGG CCGCCGCCTG A
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| Protein sequence | MRFGKYHGLG NDFLVVDLRD PEVAAGTGHA GEVPSPAVVR ALCERRFGIG ADGIMAVLPA
LGDGDARLRV LNSDGSEAEM CGNGLRCVVK YLGERDPALR GRETLNIETG AGLLRCRAHR
SDTALGDGGI AAIEQVTVDM GRPRLERAQI PMHGPAEERC ISEPLAIAGR PLDITAVSMG
NPHAIAFVDV HGAEQRALAE LIGPSLERHP WFPRHTNVEL AHLRRAPQSA ADDDGDSADS
PTVIELVVWE RGCGITLACG TGACATAVAA CLTGRARPGE AITVHLLGGP LAITVGAELD
SVRMRGPATH VFDGVVPASL LRAAAA
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