| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3262 |
|---|
| Symbol | |
|---|
| ID | 8545650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4498053 |
|---|
| End bp | 4498973 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646387929 |
|---|
| Product | von Willebrand factor type A |
|---|
| Protein accession | YP_003267657 |
|---|
| Protein GI | 262196448 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.171648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0120421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCTA GCAGCTCGAC GAGCGCGCGC GAGAGCCGCG AGCGCGACAA ACTCTTCGAC
GAGGCCTTCC TCAAGAAGCT CGAGTACCTG CACGTGGTCT CGCGCAAGAT CTTCACCGGC
GGCCAGCGCG CCGAGCGGCG TATGCGCAAG GTCGGCTCGG GTATCGAGTT CGCCGACCAC
CGCCGCTACA CCTGGGGCGA CGACTTCCGC TACATCGACT GGAACGTCTA CGGGCGCGTG
GACAAGCTGC TATTGCGCCT GTTCGAGGAA GAGGAAGACC TCTACATCTA CATCCTGCTC
GACGCCTCGC GCTCGATGAC CATCGGCGCG CCGCCCAAGC TGCACTACGC CATGCAGGTG
GCGGCGGCCC TGGCCTACGT CGGCCTGGCC AACCTCGACC GCGTCGCCCT GCTGCCCTTC
TCCGAGGGGC TGCACGGCCG CCTGCCGCCG GCGCGCGGCA AGAACCGCAT CTTCAAGGTG
TTCGAGTTTC TGCGCGGCGT CGAGGTCGGC GGCGACACCG ATCTCGCCGC CTGCGTGCGC
AAGTTCGTGC ACCAGAACAA GCGCCGCGGC TTGGTCGTCC TGCTGTCCGA CTTCTACGAC
CCGCGCGGCT TCGAAGAGGC GCTCAACACC CTGCGCTACA ACAAGTACGA GCCCTTCGTG
CTGCAGATCT ACGACCAGAA AGAGGCTCAC CCCAGCCTGC ACGGCGACCT CAGCCTGGTC
GACTGCGAGA CCGGCGAGGT CAAAGAGGTG ACCATCTCGC GCTCGCTGCT CGAGGCCTAC
GAGCGCGAGC ACGAGAAGTT CTGCGGCGAG CTGCGCGAGT TTTGCACCGC TCGCGCCCTG
CCCTACTTCC GCACCCACAC CGGCGTCGCC TTCGACGAGC TCATCCTCAC CATCTTCCGC
AGCGGAGGCT TTTTGCGGTG A
|
|---|
| Protein sequence | MPPSSSTSAR ESRERDKLFD EAFLKKLEYL HVVSRKIFTG GQRAERRMRK VGSGIEFADH
RRYTWGDDFR YIDWNVYGRV DKLLLRLFEE EEDLYIYILL DASRSMTIGA PPKLHYAMQV
AAALAYVGLA NLDRVALLPF SEGLHGRLPP ARGKNRIFKV FEFLRGVEVG GDTDLAACVR
KFVHQNKRRG LVVLLSDFYD PRGFEEALNT LRYNKYEPFV LQIYDQKEAH PSLHGDLSLV
DCETGEVKEV TISRSLLEAY EREHEKFCGE LREFCTARAL PYFRTHTGVA FDELILTIFR
SGGFLR
|
|---|
| |