Gene Hoch_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3259 
Symbol 
ID8545647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4492361 
End bp4493128 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content74% 
IMG OID646387926 
ProductPyridoxine 5'-phosphate synthase 
Protein accessionYP_003267654 
Protein GI262196445 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0247328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA ACCTGTCGGT CAACCTCAAC AAGGTGGCGC TCTTGCGCAA TTCGCGCGGC 
GCCGACAATC CCTGTCCGGT GCGCGCCGCC GAGGCCTGCA TCGCGGCCGG CGCCCCCGGT
CTCACCCTGC ACTGGCGCGA GGACGAGCGC CACACCCGCG AGGGCGACGT GCGCGCGCTG
CGCAAGCTCG CCGACGAGCG CGGCGTGGAG TTCAACCTCG AGGGCGACGC GCGCCCGGCC
ATCGTCGCCA TCGCGCTCGA GCTGCGGGTC ACCCAGTTCA CCCTGGTGCC GGTCACGCCC
GGCGAGATCA CCAGCGACCA CGGCTGGGAC CTGCCGCGCG AACACGACAC CCTCGCGCCG
ATCCTCGAGC GCTGCCGGGC GGCCGGCGTG CGCACCTCGA TTTTCATGGA CCCGGTGGCC
GAGAACATGG CCGCCGCCGC GCGCACAGGG GTCGATCGCG TCGAGATCTA CACCGAGCCC
TACGCCGCCG CCTTTGGCAC CGCGACGCAA GACCAGGCGC TGGCGCAGAC CGCGGCCGCG
GTCGCCGCCG CGCGCGCGCG TGGCCTGGGC GTCAACGCCG GCCACGACCT CGACCTGTAC
AACCTGCCGC TGCTGGCGCG CGCGGCGCCC GGCATCGACG AGGTCTCGAT CGGCCACGCG
CTGATCGCCG ACGCGCTGTA CTGGGGCCTG GAGCGGACCG TGCGCGCCTA CCTCGACGCC
GCCCGCGGCG TCGACATCGC CGAGCCGCCG CAGACCCGGC CGCGCTGA
 
Protein sequence
MAINLSVNLN KVALLRNSRG ADNPCPVRAA EACIAAGAPG LTLHWREDER HTREGDVRAL 
RKLADERGVE FNLEGDARPA IVAIALELRV TQFTLVPVTP GEITSDHGWD LPREHDTLAP
ILERCRAAGV RTSIFMDPVA ENMAAAARTG VDRVEIYTEP YAAAFGTATQ DQALAQTAAA
VAAARARGLG VNAGHDLDLY NLPLLARAAP GIDEVSIGHA LIADALYWGL ERTVRAYLDA
ARGVDIAEPP QTRPR