| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3257 |
|---|
| Symbol | |
|---|
| ID | 8545645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4490708 |
|---|
| End bp | 4491199 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646387924 |
|---|
| Product | CheW protein |
|---|
| Protein accession | YP_003267652 |
|---|
| Protein GI | 262196443 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0447869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACG TCCTCACATT TCGCGTCGCC GAGGCGACCT TCGCCGTACC GCTCGAGCGC
GTCGCCGAGG TGACGCTGCG CGTAGCGCTC GAGCCGCTGC CCGAGCTGGG AGCGCCCATC
GCCGGCTATT TCGTCTATCG CGGCCGCAGC ATCGCGGCCG TGGACCTGCG TCAACGCCTC
GACTACCCGG CCCGCCCCAT CGACCTCGCC GACCACTTCG TGATCGCGCG CGGCCGCGCG
CGCCTGCTGG CTCTGATCGT CGACCGCGTG CTCGGTGTGC GCCATATCGA TCTCCAGGCC
GTCGAGCCGA CCCCGGCGAA CAGCGAGTGG ATGGTCGGCA TCGTGGCGCT GAGCGACGGC
CTGTTGCTCA TCGCCGACCT CGAGGCCGCG CTCTCGGTCG AGCAGAACCG CAGCGTGGCC
GAGGCGCTCG CCCGGCTAAC GCCCCTCGAA TCCGACGCGC TGCCGGCACG CGATGCCGGA
GACCCCGCGT GA
|
|---|
| Protein sequence | MTDVLTFRVA EATFAVPLER VAEVTLRVAL EPLPELGAPI AGYFVYRGRS IAAVDLRQRL
DYPARPIDLA DHFVIARGRA RLLALIVDRV LGVRHIDLQA VEPTPANSEW MVGIVALSDG
LLLIADLEAA LSVEQNRSVA EALARLTPLE SDALPARDAG DPA
|
|---|
| |