Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3203 |
Symbol | |
ID | 8545591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4415314 |
End bp | 4417611 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646387870 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_003267598 |
Protein GI | 262196389 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0763722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTTCTC TGCGCTACAA GCTGTTCGTT CCGCTGTTTC TGGTCGGTGC CCTGGCGTCG ATCGGTTTTC CCTATCTGAC CTACGTGATG GTGCTCGACA AGCTCGAGCA CCAGGCCGTG CAGCGCATGC GCACCATGGT CCACTCGGTC AACTACGCGG TCGAGAGCAT GGACGAGCTG TCTCAACTCG AGCGCTTCGT CATGGCGGTG GGCGGCGAGG ACGACATCGA GGTGCTGGCC ATCATCGGCG GCGAGCCCGC GCGCGTGGTC ACCAGCAGCC GCTTTGGCTG GAACGGACGG CAGATTTCCG ACATGGCGTC CGAGATCCCG CTCGACGCCA TCGCCGAGGC GCAGCGGAGC GGGGGCGAGC GGCTGCTCGA GGAGGGCGAG GATCACCTGC GCCTGCTCTC GCCCCTGTAC CTCAACAAAA CCGGGCGCGC GCGCGCGATG TGGCACAGCG GCCTGATCAT GGCCGTGATC GACTTCGGCA CGGTGCGCCA CGAGGCCGAG CGCGATGCGG TGCAGGCCTC GCTGTTGGCG CTCGGTCTCA TTCTGGTGCT GGCGACCGGC GCGGTCGTGA CGCTGCGGCG CGTGGTCCTG CGCCCGTTGC GCGCGGTCTC GGCCGCCATG GGGCGACGCA CGGCCGGCCA GCGACAGGCC TACGCCAAGG TCTACGCCGA CGACGAACTA GGTGAGCTGG CGCGCACGCT CAACCACATG GTCGATGTGC TGAGCGATAA GGAAGCTCAG TTGCGCACCT TGATCGACAA CGTGTCCGGC GCCGTGTATC AGCTCAAGTG GCAAGGCAAC TGGCGGCTGG CCTTCATGAG CGAACACCTC GAGGAGCTCG CCGGCTATCC GTCGAGCTAC CTCGACGGCA ACTTTCGCTT CGTCAACCTC ATCCACCCCG ACGATGTCGG CGTGCTGCGC GCCCTGATGC AGGAGACCAC GAAGGCGCGC GGCAGCGGCT ACCAGCTCGA GTACCGGATC ATCCACGCCG ACGGCGAGGA GCGGTGGGTG CTCGACCGGG TGCGCCTAGT TTACGACGAC AGCGGCCGGC CGCTGCACGC CGACGGCATC CTGGTCGACG TCACCGAGCG CCATCAGCAG AGCGAGCTTC TGCGCGAGGC CAAGGAGGCG GCCGAGGTGG CCTCCCGGGT CAAGAGCGAC TTCTTGGCGA CCATGAGCCA CGAGATCCGC ACGCCGCTCA ACGGCGTCAT CGGCATGGCC TCGCTGCTGC TCGACACCGA GCTGAGCGAC GAGCAGCGCG AGTACGCCGA GACCATCGAT GTCTCGGGCA ATCTGCTGCT GGCGCTGATC AATGACATCC TCGATTTCTC GAAGATCGAG GCCGGGCGTA TGGAGCTCGA AGAGGTCGCC TTCGAGCTGC GCTACCTGAT CGAGGAGACG CTCGCGATCG TGGCGCCGCG GGCGCGCGAG AAGAACCTCA GCCTCGACTG GCAGGCCGAG GCCGCGGTTC CCCGGCGCGT GATCGGCGAC GCGCAGCGGA TGCGCCAGGT GCTGCTCAAT CTGGTCGGCA ACGCCATCAA GTTCACGCAC GACGGCTCGG TCGAAATCCG CGTGCGGGTA CGCGAGCGCG AGGGCGACGC GCTGCTGCTC GAGGTCGCGG TGGCCGACAC CGGCATCGGC ATCTCGCCGG GCGAGATGAT GCGCATCTTC GAGCCCTTCT CGCAGGCCGA CGCCTCGACC ACGCGGCAAT ACGGCGGCAC CGGCCTGGGG CTGGCCATCT GCAAGCGTTT GGTCGATCGC ATGGGCGGGA CCGTGGTGGT CAAGAGCCAG CCCGGACGGG GCTCGACCTT CTCGTTCACG GTGCGGCTGC GCGTGGCCCC GCGGCGCGGC GTGACCACGC CGGCGGCGGC CCTGGCTGTG CCCGCGCTGA GCGAGGCGCT GCGCGCGCGG CGCGTGCTGG TGGCCGAGGA CAACGAGGTC AATCGGCGGG TGGTGGTGCA TATCTTGAAA CAGCTCGGCT TCGAACCCGA GGCGGTGGAA AATGGCCGCG CCGCGGTCGA GGCCTTTGCC GCCGGGACCT TCGACCTGGT GCTGATGGAC TGCCGCATGC CGGAGATGGA CGGCTTCGCG GCCACCCGCG TGCTGCGCGA CCAGTTCGAC GCGCTCGTGC CGATCATCGC GGTCACGGCC AGCGCCTCGG CCGACGATTC GCGCATGTGC CTCGAGGCCG GCATGGACGA CCATATGAGC AAGCCGGTGA CCAAAGACGG GCTCTGCGCC ATGCTCCGGC GCTGGCTGCC GACCTCCAAC CCGCCCGCGT CGTCGTAG
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Protein sequence | MASLRYKLFV PLFLVGALAS IGFPYLTYVM VLDKLEHQAV QRMRTMVHSV NYAVESMDEL SQLERFVMAV GGEDDIEVLA IIGGEPARVV TSSRFGWNGR QISDMASEIP LDAIAEAQRS GGERLLEEGE DHLRLLSPLY LNKTGRARAM WHSGLIMAVI DFGTVRHEAE RDAVQASLLA LGLILVLATG AVVTLRRVVL RPLRAVSAAM GRRTAGQRQA YAKVYADDEL GELARTLNHM VDVLSDKEAQ LRTLIDNVSG AVYQLKWQGN WRLAFMSEHL EELAGYPSSY LDGNFRFVNL IHPDDVGVLR ALMQETTKAR GSGYQLEYRI IHADGEERWV LDRVRLVYDD SGRPLHADGI LVDVTERHQQ SELLREAKEA AEVASRVKSD FLATMSHEIR TPLNGVIGMA SLLLDTELSD EQREYAETID VSGNLLLALI NDILDFSKIE AGRMELEEVA FELRYLIEET LAIVAPRARE KNLSLDWQAE AAVPRRVIGD AQRMRQVLLN LVGNAIKFTH DGSVEIRVRV REREGDALLL EVAVADTGIG ISPGEMMRIF EPFSQADAST TRQYGGTGLG LAICKRLVDR MGGTVVVKSQ PGRGSTFSFT VRLRVAPRRG VTTPAAALAV PALSEALRAR RVLVAEDNEV NRRVVVHILK QLGFEPEAVE NGRAAVEAFA AGTFDLVLMD CRMPEMDGFA ATRVLRDQFD ALVPIIAVTA SASADDSRMC LEAGMDDHMS KPVTKDGLCA MLRRWLPTSN PPASS
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