Gene Hoch_3192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3192 
Symbol 
ID8545580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4400454 
End bp4401275 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID646387859 
Productprotein of unknown function DUF882 
Protein accessionYP_003267587 
Protein GI262196378 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.559007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.122497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACGTC GCATCCACTC CTGGCTCACC ATCGCATTCA TCGGATTGGC CCTGATTCTG 
CCGCTTCCCG GCATGTTGGA GGCCAAGGCC GAGGCGCGTC CCTCTGCGAG CAGCTCGGGG
AAGGAGGCCA AGGCCTCCCA GGGCGCGAAG ACGCGCTCGG CTCGCTCGTC GAAGCGGCGC
ACGCGTCGGG CGCGCAAGCG GGCGCAGCGG GCGCGCAAGA TGAAGGTGTG CAAGCGGCGC
AACGGCAAGC GGCGCTGCCG CTGGGTGGCC AAGTTCGACG GTCACGGCGT CTCGCAGACC
AAGCTGCGCG AGGAGCCGCT GGACAAGCCC TCGGGCGAGG TCTGGGTGTA CGCGGTCAAT
TTTCGCGAAG AGATCAAGGT GGCGCTGTAC GACGACGAGG GCGAGCTTGA CCCCGAGGCC
CTGGCGCAGC TCGATCACCT GTTCCGCTGC CGTCGCACCG GCGAGGAGCG GGCGGTGGAT
CCGCGGCTGT ACGAGATTCT GTCGACGATT TACGACCACT TCGGGCAGCA GCGCATCGAG
CTGGTGAGCG GCTTCCGCGA CCAGGAGAAC CAGGGCAGCC GGCATTTCCA CGCCAGCGCC
ATGGACATCA AGATTCCCGG CGTGCCGATG CGCAAGCTGT ACGAGTACGC GACCTCGCTG
GACGCGGGTG GCATGGGGAT CGGGAAGTAT CCGCGCTCGG GCTTCGTGCA CGTGGACTGG
CGGGCGCCGG GCGAGAAGAG CTACCGCTGG ACCGATCACA GCGGCCCGGG CGAGAAGAAG
CCCAAACGCC GCCGCAGCCG CCGCAATCGC CCGAACAGCT AG
 
Protein sequence
MTRRIHSWLT IAFIGLALIL PLPGMLEAKA EARPSASSSG KEAKASQGAK TRSARSSKRR 
TRRARKRAQR ARKMKVCKRR NGKRRCRWVA KFDGHGVSQT KLREEPLDKP SGEVWVYAVN
FREEIKVALY DDEGELDPEA LAQLDHLFRC RRTGEERAVD PRLYEILSTI YDHFGQQRIE
LVSGFRDQEN QGSRHFHASA MDIKIPGVPM RKLYEYATSL DAGGMGIGKY PRSGFVHVDW
RAPGEKSYRW TDHSGPGEKK PKRRRSRRNR PNS