| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3185 |
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| Symbol | |
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| ID | 8545573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4388666 |
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| End bp | 4389826 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387852 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003267580 |
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| Protein GI | 262196371 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0319469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.327167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCC CCGTCTGCCT GCTCGTGTCC CTGCTGTGCG CGTTCCCGGT CGCCGCCTCG
GCGCAGACCC AGACCCCGCC AGCGACACCG GCTGAGCCAG CGGCTGAGAC GGGCGACACG
CTCGCGCAGG CGGCCGAGGA TGCGGTCGAA CGCATCGAGC GCGATGAGCT GCGCATCGGT
ATCAGCACGT TCCCGCCCTT CGTGCTCACC GGAGGTAATC CCCACAGCGG CTTCTCGATC
GAGCTGTGGC GGCTGGTCGC CGAGAGCCTG GACGTCGATT ACACCTTCGT CGCCAGCACC
GGCGTGGCCG ACAAACTCGC GCGCCTGCGC GGCGACCAGC TCGACGTCGC CATCGGCGGC
ATCACGGTAA CCACCGAGCG CGAGCGGCTG GTCGATTTCA CCCACCCGGT CACCGACAGC
GGTCTCGGCA TCCTGGTCCG CGAAGGCGAA GGCGGCGGCG CCGGCTTTTT CCAGCGCATC
ACCTTCAACG ACAGCAAATG GGGCCTGGTC ATCGGATTTT TGGCCCTGGT CATCGTCGCC
GGCAACCTCA TCTGGTGGGC CGAGCGGGGC CGCGAATCGT TCAGCGATAA GTACTTCCCC
GGCGTCTTCG AGGGCATGTA CTGGGCCATC GTCACCGCCA GCACCGTGGG CTACGGCGAC
AAGACGCCGA CGAGCTGGCG CGGCCGCGCG ATCGCCGGGC TCACCATCGT CATCACGCTG
CCGCTCTTCG CCCTGTTCAC GGCCGAGCTG GCCTCGACCA TCACGGTCGC CGAGATCCAA
TCGCGCATCG ACGGACCCGA GGATCTGCGC GACAAGCGCG TCGGCGTGGT CCGCGGCACC
GTGGCCGCGG ATTGGGCCGC GGGCTTCGGC CTCGAACTCG TCCAGTGGGA CGGAATCGGC
GAGGTCTACG ACGCGCTCGA TCGCGAGGTC GTGGACGCCG TCATCCACGA CGCGCCCAGC
CTGCAGTACT ACGCGCAGAA CCAGGGCAAG GACGACGTGC AGGTGGTCGG CGGTCTGTTC
CAGGCGCAGT CCATCGCCTT CGCGCTGAAC GAAGGCTCGC CGCTGCGCGA GCCGCTCAAC
CGCGCCCTGC TCTCACTGGT CGAGTCGGGC GAACTCGAGC GGCTGCGCGT GCGCTGGTTC
GGCACCGGTG CGCGCAAGTA A
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| Protein sequence | MRFPVCLLVS LLCAFPVAAS AQTQTPPATP AEPAAETGDT LAQAAEDAVE RIERDELRIG
ISTFPPFVLT GGNPHSGFSI ELWRLVAESL DVDYTFVAST GVADKLARLR GDQLDVAIGG
ITVTTERERL VDFTHPVTDS GLGILVREGE GGGAGFFQRI TFNDSKWGLV IGFLALVIVA
GNLIWWAERG RESFSDKYFP GVFEGMYWAI VTASTVGYGD KTPTSWRGRA IAGLTIVITL
PLFALFTAEL ASTITVAEIQ SRIDGPEDLR DKRVGVVRGT VAADWAAGFG LELVQWDGIG
EVYDALDREV VDAVIHDAPS LQYYAQNQGK DDVQVVGGLF QAQSIAFALN EGSPLREPLN
RALLSLVESG ELERLRVRWF GTGARK
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