| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3167 |
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| Symbol | |
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| ID | 8545555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4359197 |
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| End bp | 4363432 |
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| Gene Length | 4236 bp |
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| Protein Length | 1411 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646387834 |
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| Product | A-macroglobulin complement component |
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| Protein accession | YP_003267562 |
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| Protein GI | 262196353 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.541025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA CGAGCAAACG CTCGCTTCCC CTTCGTTCCC TGGCCCTGTG TCTGTCGCTG
GGCGCGCTGT CCTGCGGCGC CCGCTCTGCC GCCGTCGAAT CCGGCGGCGA GGGCGGCGCC
GGGGATCCCG TACAGATCGT CGAGCCCGGC ACCGTGCCGG CGCCCTCGGC GCTGCAGAAT
CAGCTCGCGG CCCAGGACCC GGCGCGGCCG CAGATGCCGT CCGACGACCA GAAGCGTCTG
GGCGCGGCCA TCGACACGTA CATGCAGCGG CACGCCTCGC AGCGCCTGTA CATGCACGTG
GACAAGCCGC TGTACCGGCC CGGCGAGACC ATCTGGTTTC GCGTCTGGGA GCTGGCCGCG
CCGACGCTCA CCAAGCAGGA GCAGAACCAC GGCGTCTCGG TCGACCTGGT GAGCCCGCGC
GGCTCGCAGG TGCTGTCCAA GCGCGTGCTG GCGCAGGCCG GCGTGGCCGC GTTCGACTTC
GAGCTGCCGG CCTCGGTCGA GGGCGGCGTG TATATCCTGC GCGCGCGCAG CGATCTCGGC
GCCACGCTCG AGCGCGAGGT GGTGGTCTCG CAGTACCAGC CGCCGCGCAT CAAGAAGAAG
GTCGAGTTTC TGCGCAAGGC CTACGGCGCC GGCGACGAGG TCGCGGCCGC GGTGTCGCTG
GCGCGGGCCA CGGGCGAGCC GCTGGTGACC GACAAGGCCA CGGCCATCGT CACGGTGGAC
GAGATCGAGG TGGCGCGCTT CCCGGTGCAG ACCAGCGAGG ACGGCGAGGC CGTGGCCCGC
TTTACGCTGC CGCCGCAGAT CGCGCGCGGC GACGGTCTGC TCACCCTGCT GGTGGACGAC
GGCGGCGCCG TGGAGTCGAT GCAGAAGCGC ATCCCCATCC TGGTCAAGTC GCTGGACTTG
CAGCTCTTCC CCGAGGGCGG TCAGCTCGTG AGCGGGCTGC CGGGCCGGGT CTACTTCCAG
GCCAAGAACC CGCTGGGCAA GCCGGCCGAT ATCGCCGGCC GCGTGCTCGA TGACCGCGGC
CAGGTGGTGG CCCAGTTCTC GTCGCTGCAC AACGGCATGG GCCGCTTCGA GCTCACGCCG
GCCAAGGGCC GCATCTATCA CGTGGAGGTG ACCAGCCCGC GCGGCATCGA GGCGCCCTTC
ACGGTGCCCC CGGCGCGGCC CGATGGCTGC TCGCTGATGG CGGTGGACGA CCCCGAGGGC
CAGCGCGACG AGGTGCGCGT GGCGGCCTGG TGCTCGTCGC CGCGCACGGC CGTGGTCACC
GGCATCCTGC GCGAGAAGCG CCTGGCCGAT GTCGCGGTCG AGGTCGGCGC CGAGGCGCCC
ACGGTGGTCG CGATCCCGGT GCCGCCGGGC GCCCAGGGCG CGATGCGGGT GACGCTCTTT
GACGAGCACC TCAAGCCGGT GGCCGAGCGG CTGGTGTACA CCGGGCGCGG CCGCGATATG
CAGGTGTCGA TCTCGACCGA CCGTCCCAGT TACGCGCCCC GCGACCGGGT CGCGCTCACG
GTCACCACCC GCGATCTGCG CGGCAAGCCG GTGGCCGCGG ATGTGTCGCT GGCCGTGGTC
GACGACACGG TGCTGAGCTT CGCCGACGAC AAGAGCGCGG CGATCCTGGC GCGCGTGTAT
CTCGAGGCCG AGATGCCGGG CCAGGAGATC GAGGAGCCGC GCTTCTACTT CTCCGAGGAT
CCCAAGGCCG GGCCCGCGCT CGACCTGGTG CTCGGCACCC AGGGCTGGCG CCGCTTCGTG
TGGCAGGAGC TGTTCGCCGA GGCCCGCGGC GGCGGTTCTC GGAGCAGTGT GGTCGGCGGC
GCGCTGGCCG TGCCCGAGGC GGATATGGCC ATGGACGAGG AGATGGAGGC GCTCGACGAC
GCGATGCCGA TGCCGCCGCC GCCGCCCGCG CCGGTGGCCG CCCAGGCCGC GCCCGGCGCC
AACGAGGCCA TGGCCGCCAA GCCCGAGGCG CCGGCCGAGC CCGCGCCCGA GCTCGAGCGC
GCCGAGGCGC CGAGGCGGCT GGCGGGCGGC TTCGGCCGCG GGCTGCGCGC CCGCCGGGCG
CGGCCCATGG AGAAGAAGCG GATGATGGCG GCCGACGAGG ACGAGTGGGG CGGCGAGGTC
CGCGGCTGGG CCGTGGTGCG CGAGTTCCCG GCGCCCAACT ACGAGCCCGG GTATTCGGGA
CCGCGGGTCG ATTTCCGCGA GACCATCTAC TGGCAGCCCT CGGTGCAGAC CGGGGCCGAC
GGTACGGCCG AGGTGTCGTT CTCGCTCTCG GACGCGGTGA CCTCGTTCCG GGCCACGGCC
GAGGGCGTCT CGGGCGGCGG TCTGCCCGGC CGCGGCGAGG CCCTGGTGCA GTCCAAGCTG
CCGGTGTCGC TGGCCGTGAC CATGCCGCTC GAGGTCTCGG CCGGCGACTC GCTCGAGCTG
CCGGTGGTGC TCACCAACGA GACCGAGCGG CCGCAGAGCG CGCGCATCAC CAGCGAGTTC
GGCGCCGCCT TCCGCGTGCG CGGCGGGGTG CCCAAGCAGG TGCGGCTCGA GCCCGGCGAG
CGCCAGTCCT TCTTCGCCCA GCTCGAGGTG GTCGGCAACG GCAAGGATCC CGAGGCCGGC
AGCGCGCGCA TCGCCATGGA TACCGCCAAC CTGTCCGATG AAGTGGCGCG CACCATCCGC
GTGGTGCCCC TGGGCTTCCC GCAGGAGCTG GCGGCCAGCG GCACGCTCGA CCAGCGGGCC
ACGCACAGCT TCGAGCTGGC CGGCGCCATG CCCGGCAGCA TCGAGGCGAC GATCACGATG
TATCCCTCGC CGCTCGCGAC CATGGTCCAG GGCACCGAGG CGCTGATCCG CGAGCCCGGC
GGCTGCTTCG AGCAGGCCTC GAGCAGCAAC TATCCCAACG TGATGGTGCT GTCGTATCTG
GAGAAGAACG ACGCCGCCGA CGTCGCCCTG GTGGAGCGCA CGATGGGCGC GCTCGACCGC
GGCTACGCGC TGCTCACCGG CTATGAGAGC AAGTCCAAGG GCTACGAGTG GTTCGGCGGC
GACCCCGGCC ACGAGGCGCT CACGGCCTAC GGTCTGCTGG AGTTTGTGGA TATGGCCCAG
GTGTACGGCG ACGTCGATCC GCAGATGGTG CAGCGCACGC GGCGCTGGCT GATGAGCCGG
CGCGACGGCG AGGGCGGCTT TCTGCGCAAC GATCGCGCGC TGGATTCCTT CGGCCGGGCG
AGCGTCGAGG TGACCAATGG CTACATCACC TACGCGCTCA CGGCCGCGGG CGAGAAGGCG
CTCGACAAGG AGATCGCGTA CCAGCAGCGC ATGGCCAAGG AGACCAAGGA TCCGTACCTG
ATGGCGCTGG CCGCCGGCAC CCTGGTGCAC GTCAAGGCCG CCGAGGCTCA GAGCGCGGTC
ACCCGGCTGC GCAGCATGCA GGCCGAGGAC GGCTCGTTCG CGGGCGCCGA TCACTCGATC
ACGCGCTCGG GCGGCGAGGC CCTGATCATC GAGACCACGG CGCTGGCGGC CAAGGCCATG
ATCGACCTGG GCCTGGCCGG CGACGCCGAC ACGCGCGCGG CCATCGAGTG GCTCAACGCG
CACCGCGGCG GCTACGGGCA GTTTTCGTCC ACGCAGGCGA CCATCCTGGC GCTGCGCGCG
CTCTCGGCCT ACGCCGAGGC CAGCCGGGCG ACGCAGAGCA GCGGCGTGGC CACGCTGCTG
GTCAACGGCA AGCAGGCGGG CACGCTGCGC TTCGAGGCCG GCCACAAGGA CGCGCTGGTG
TGGGAGGACG TGGCGCGGCT GCTGCACTCG GGCAAGAACA CGCTCGAGCT GCGCCTCGAC
TCGGAGCAGT CGCTGCCGTA CAGCATCGGC ATCTCGTATC GCTCGAAGAT GCCGGCCTCG
AACCCCGAGA CCGTGGTCCG CGTGGCGACC TCGCTGAGCA AGGACGAGGT GCCGGTGGGC
GAGGGCGTGC GCATGAAGGT CACGGTCGAT AACACCACCG ACGAGGGCCA GCCCATGACC
CTTGCGCGCG TCGGTATCCC GGGCGGCCTG GCGTTCCAGA CCTGGCAGCT CGAGGAGCTC
AAGGACAAGG GCGTCATCGG CTTCTTCGAG ACCCGCGAGC GCGAGGTGGT GCTGTACTTC
CGCGACCTGG CGCCCAAGGC GCACAAGGAG ATCGATATTG ATCTTCTCGC AAGGGTTCCG
GGCAGCTACG TGGCGCCGGC GTCGCGCGCG TACCTGTACT ACACCGACGA GTTCAAGCAC
TGGGTGCCGC CCACCGAGGT GCGCGTCACC CGCTGA
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| Protein sequence | MQRTSKRSLP LRSLALCLSL GALSCGARSA AVESGGEGGA GDPVQIVEPG TVPAPSALQN
QLAAQDPARP QMPSDDQKRL GAAIDTYMQR HASQRLYMHV DKPLYRPGET IWFRVWELAA
PTLTKQEQNH GVSVDLVSPR GSQVLSKRVL AQAGVAAFDF ELPASVEGGV YILRARSDLG
ATLEREVVVS QYQPPRIKKK VEFLRKAYGA GDEVAAAVSL ARATGEPLVT DKATAIVTVD
EIEVARFPVQ TSEDGEAVAR FTLPPQIARG DGLLTLLVDD GGAVESMQKR IPILVKSLDL
QLFPEGGQLV SGLPGRVYFQ AKNPLGKPAD IAGRVLDDRG QVVAQFSSLH NGMGRFELTP
AKGRIYHVEV TSPRGIEAPF TVPPARPDGC SLMAVDDPEG QRDEVRVAAW CSSPRTAVVT
GILREKRLAD VAVEVGAEAP TVVAIPVPPG AQGAMRVTLF DEHLKPVAER LVYTGRGRDM
QVSISTDRPS YAPRDRVALT VTTRDLRGKP VAADVSLAVV DDTVLSFADD KSAAILARVY
LEAEMPGQEI EEPRFYFSED PKAGPALDLV LGTQGWRRFV WQELFAEARG GGSRSSVVGG
ALAVPEADMA MDEEMEALDD AMPMPPPPPA PVAAQAAPGA NEAMAAKPEA PAEPAPELER
AEAPRRLAGG FGRGLRARRA RPMEKKRMMA ADEDEWGGEV RGWAVVREFP APNYEPGYSG
PRVDFRETIY WQPSVQTGAD GTAEVSFSLS DAVTSFRATA EGVSGGGLPG RGEALVQSKL
PVSLAVTMPL EVSAGDSLEL PVVLTNETER PQSARITSEF GAAFRVRGGV PKQVRLEPGE
RQSFFAQLEV VGNGKDPEAG SARIAMDTAN LSDEVARTIR VVPLGFPQEL AASGTLDQRA
THSFELAGAM PGSIEATITM YPSPLATMVQ GTEALIREPG GCFEQASSSN YPNVMVLSYL
EKNDAADVAL VERTMGALDR GYALLTGYES KSKGYEWFGG DPGHEALTAY GLLEFVDMAQ
VYGDVDPQMV QRTRRWLMSR RDGEGGFLRN DRALDSFGRA SVEVTNGYIT YALTAAGEKA
LDKEIAYQQR MAKETKDPYL MALAAGTLVH VKAAEAQSAV TRLRSMQAED GSFAGADHSI
TRSGGEALII ETTALAAKAM IDLGLAGDAD TRAAIEWLNA HRGGYGQFSS TQATILALRA
LSAYAEASRA TQSSGVATLL VNGKQAGTLR FEAGHKDALV WEDVARLLHS GKNTLELRLD
SEQSLPYSIG ISYRSKMPAS NPETVVRVAT SLSKDEVPVG EGVRMKVTVD NTTDEGQPMT
LARVGIPGGL AFQTWQLEEL KDKGVIGFFE TREREVVLYF RDLAPKAHKE IDIDLLARVP
GSYVAPASRA YLYYTDEFKH WVPPTEVRVT R
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