Gene Hoch_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3160 
Symbol 
ID8545548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4346802 
End bp4347269 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content66% 
IMG OID646387827 
ProductCBS domain containing protein 
Protein accessionYP_003267555 
Protein GI262196346 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.418255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAG AAATTGCAGC GACTCCCGTA TCTGAGGTCA CCATCCGCGA GCCCGTCCGG 
GTCTCGCCCG AGGCCAAGCT CATCGACGTC GTCAACAGCC TGCGTGAGAA GCGCCGCGGC
GCCGCCATCA TCGAGGACGG CGGCTCGGTC GTCGGCATCT TCACCGAGCG CGATCTCATG
CTGCGCGTCG ACCACAGCGC CGGCGAGAGC TGGCACGACA AGCCCGTGCG CGACTTCATG
ACCGGCGACG TGGTCATGGT CAAAGCGCAG GACTCGATCT CGGTCGCGGT GCAGAAGATG
AGACAGGGTC TGTTTCGCCA TCTGCCCGTG GACCTGGGAC CGGGCAAGCC CGTGCGCCTG
GTGTCGATCC GCGACGTCCT GGCCTACATC GCCGAGCACT TCCCGGCCGA GTTCCTCAAC
CTGCCGCCGG ATCCCGAGCA CGAAGCCACC AGCCGCTGGG GCGGCTGA
 
Protein sequence
MLKEIAATPV SEVTIREPVR VSPEAKLIDV VNSLREKRRG AAIIEDGGSV VGIFTERDLM 
LRVDHSAGES WHDKPVRDFM TGDVVMVKAQ DSISVAVQKM RQGLFRHLPV DLGPGKPVRL
VSIRDVLAYI AEHFPAEFLN LPPDPEHEAT SRWGG