| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3146 |
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| Symbol | |
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| ID | 8545534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4324878 |
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| End bp | 4326197 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646387813 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003267541 |
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| Protein GI | 262196332 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.654082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.268339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TCTTTTCTGT GTTGCTCGCC TGCGCCACGA TCGGCGCCTG GGGCTGCGAT
AAAAAAGACG AGGCCGCGGG AACGGAAACC GCAGCGACCA CCGAAGAGGC CAAGGAAGTC
ACGATCTCGC TGTCATGCGG CGCGGTCGGC CAGGAGCTCG AGCTGTGCAA GAAGAGCGCA
GAGGAGTGGT CGAAGAAGAC CGGTAACAAG GTCAACATCA TCTCGACGCC CAACGGCTCC
ACCGATCGCC TGGCTCTCTA CCAGCAGATC CTGGGCGCGG CCTCCAATGA CATCGATGTG
TTCCAGATCG ACGTGGTCTG GCCGGGCGTG CTCGCCAGCC ACTTCCTCGA CCTCAAGCCG
CACCTGGGCG GCGCCGAGAG CGAGTTCTTC CCCGCGCTGA TCGAGAACAA CACGGTCGGC
GACAAGCTGG TCGCCCTGCC CTGGTTCACC GACGCGGGCG TGCTCTACTA CCGCAAGGAC
CTGCTCGAGA AGTACGGCGC CGAGCCGCCC ACGACCTGGG CCGAGATGGC CGAGACCGCC
AAGAAGATCC AGGACGGCGA GCGCGAGGCC GGCAACGACG GCATGTGGGG CTACGTGTTC
CAGGGCAAGG CCTACGAGGG CCTCACCTGC AACGGCCTCG AGTGGGTGCA CAGCTTCGGC
GGCGGCACCA TCGTCGACGA GTCGGGCAAG GTCACCATCA ACAACCCGCA GGCCGCGCAG
GCGCTCGACA CCGCCGCCGG CTGGATCGGC ACCATCGCGC CCGAGGGCGT GCTCAACTAC
GCCGAGGAAG AGGCCCGCAG CCTGTTCCAG TCGGGCAACG CGGTGTTCAT GCGCAACTGG
CCCTACGCCT GGGGCATGGC GCAGGCCGAC GACAACATGA AGGACAAGGT CGGCGTGATC
GCGCTGCCCA AGGGCGGCGA CGGCGGCACG CACGCGGCCA CGCTCGGCGG CTGGGGCCTC
GCGGTGTCCA AGTACACCAA GAACGAGGCC GCGGCGGCCG ACCTGGTCAA GCACCTCACC
AGCGCCGAGG TGCAGAAGAT GCGCGCCATC GAGGGTTCCT TCAACCCGAC CATCGACTCG
CTGTACAAAG ACCAGCAGGT TCTCGAGGCC ACGCCGTTTT TCGGCACGCT GTACGAAACC
TTCGCCAACG CTGCGGTGCC GCGCCCGGCG GCGCAGACCG GCTCGAAGTA CAACCAGGTG
TCGAACGCGT TCTGGAACGC GAGCTACGAC GTGCTCTCGG GCAAGACCAA GGCCGCCGAC
AGCCTGGCCG AGCTCGAGAC CAAGCTCAAC GACCTGAGCC GCGGCGGCAG CGCCTGGTAA
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| Protein sequence | MKKLFSVLLA CATIGAWGCD KKDEAAGTET AATTEEAKEV TISLSCGAVG QELELCKKSA
EEWSKKTGNK VNIISTPNGS TDRLALYQQI LGAASNDIDV FQIDVVWPGV LASHFLDLKP
HLGGAESEFF PALIENNTVG DKLVALPWFT DAGVLYYRKD LLEKYGAEPP TTWAEMAETA
KKIQDGEREA GNDGMWGYVF QGKAYEGLTC NGLEWVHSFG GGTIVDESGK VTINNPQAAQ
ALDTAAGWIG TIAPEGVLNY AEEEARSLFQ SGNAVFMRNW PYAWGMAQAD DNMKDKVGVI
ALPKGGDGGT HAATLGGWGL AVSKYTKNEA AAADLVKHLT SAEVQKMRAI EGSFNPTIDS
LYKDQQVLEA TPFFGTLYET FANAAVPRPA AQTGSKYNQV SNAFWNASYD VLSGKTKAAD
SLAELETKLN DLSRGGSAW
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