Gene Hoch_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3142 
Symbol 
ID8545530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4321348 
End bp4321797 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content75% 
IMG OID646387809 
Producthypothetical protein 
Protein accessionYP_003267537 
Protein GI262196328 
COG category[S] Function unknown 
COG ID[COG3603] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.30971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0874691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCG CCCAGCAGCC CGGGCGCGGC GCGTCCGCCT TGTCGCTCAC CGTCCTCGAC 
GCCGGGCTGG CGGTGTGCCG CCTCGACGCT GCGGCACCGC TACCGGCGTG GGCGGCGGGT
GAGCGCCTGC TGTCGATCAC GCGCACGCCC GACGAGCTAT CCATCGTCTG TGACGAGGCC
CTGGCGCCGG CCGAGGTGCG CGCCGAGCGC GGCTTCCGCG CGCTCGTGGT GCACGGCCCG
CTCGCCTTTC AGCTCACGGG TGTGCTGCTG GCGCTGGTCG CGCCGCTGGC CGAGGTCGGC
GTCTCGATCT TCGCGCTCTC GACCTTCGAC ACCGACTACG TGCTGGTGCG CGCGAGCGCG
TTGCCCGCGG CCGTCGCCGC GCTGCGCGCC GCCGGTCACG AGGTGCAGGC GGGCGAGGAC
GGCTCGCAGC CGCTCAGCGC TCGATCTTGA
 
Protein sequence
MSSAQQPGRG ASALSLTVLD AGLAVCRLDA AAPLPAWAAG ERLLSITRTP DELSIVCDEA 
LAPAEVRAER GFRALVVHGP LAFQLTGVLL ALVAPLAEVG VSIFALSTFD TDYVLVRASA
LPAAVAALRA AGHEVQAGED GSQPLSARS