| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3133 |
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| Symbol | |
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| ID | 8545521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4308628 |
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| End bp | 4310151 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646387800 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003267528 |
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| Protein GI | 262196319 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0165717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.444225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGGC CCGCCGCCGA CGCCGACGAG ACCCGCCTGA GCGATAAAGC CGTGGTGGTC
GTGTTCTCCC GGGTGCTCAG CACCCTGGTC GAGCTGGCCA CGATCATCAT GCTGGTGCGT
CTCCTGAGCA AGGAGACCAT GGCCATCATC GGCTTTCTCC TGCTCGTCTA CCAGACCACG
CGCTACTTCG CGACCTTCGG CTTTCCCGAG AGCGTGTTCT ACTTCTTCGA GAAGCTCGGG
CCGCCGTATC AGCGCGCCTT CGCGCTGCGC ACCTTCTTCA TCCTCGGCGC CATGGGCGCG
TTCGCGGCCG CCCTGATGTT GGCGCTGGCC GCGCTGGCTC CGCAGGTGCT GCGCAGCTGG
GAGCCGGGAC CGCTGGCGAC GCTGCGCCAG CTTTTGCCGT GGTTGGCGCT GGTGGCCGTG
CTCGAGATTC CCACCTGGCC GATGAACAAC GTGCTGCTGG CGCTCGACCG GCAAAAGGCC
GCGTCCTGGT ACCAGATGCT CACCAGCGCC GGCAGCTTCG TGGCCCTGGT GGTGCCGGTG
CTGCTCGGCG CCGAGATCTC GGTGGCCATC TACGGCCTGG TGATCTTCGC GGTGGCGCGC
TTCGCGGTCA CGGTGGTGTG GTTTCAGCTC GTGTTGCCCG GACCCAGCGC GCCCCTGGCG
CCGGGCACGC TGCGCGAGCA GGTGCGCTTC GCCGTGCCCC TGGGGCTCAA CGCGCTGTCC
TCGCGGGTCA ATAAGTACCT CGATAAGTTC GTGGTCTCGG TGATGCTGCC GGTGGCGGCC
TTTGCCGAGT ACCAGGTCGG CGGCCAGGAG CTGCCGCTCA TCACCGCCAT CCCCTACGGC
GTGGGCTCGG TGTTCATCTC GCGCTTCGTG GCCCTGCACC TGGCCGGTGA CCGCGAGGGC
CTGCTGGCGC TGTGGTATCG CGGCATCGAG GGCGTGTCGC TGGTGGTGGT GCCAGTGGCG
ATGCTGTTCG TGGTGGTGGC CCACGACTTC ATCACCTTGG TGTTCGGCGC CGAGTACGCG
CCCGCCGTGC TGCCCTTTCA GATCTACACG CTGATCCTGC TGCACCGGGT GACGCAGTAC
AGCGCCATCC TCCAGGCCCA CGCTGACACC GCCAGCATCT TGCGCTTCAC CATGATCAGC
CTGCTGAGCA ACCTGGTGCT CAGCGTGCCG CTCACCTGGC TGCTCGGCCT CTCCGGGCCG
GCGCTGGCCA CGCTGCTGTC GGCGCTGGTG ACCTGGTACG TGTACCTCAA GCGCATCGGC
GTGCACCTGG GCGTGGGCCT CGGCGCGGTG TTCCCCTGGG CCTACTACGG CAAGGTCGTG
GGCGTCGCGG CGGTGGCCGG CGCGGTGTGC TGGGGCCTGC GCTACCTGGT CCTGGACGAG
CTGCCGCAGA TGCTCGCCCT GAGCATCGCG ACGGCGGCCT TTTTGCTGGT CTACGCAGCC
CTGGGCGCGC TCGCCCGGGT CATCGACCGC AGCCACTGGC GGATTCTCGG CGGCTGGGTG
CGGCTGCGCT TTCTGTGGCG CTGA
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| Protein sequence | MDRPAADADE TRLSDKAVVV VFSRVLSTLV ELATIIMLVR LLSKETMAII GFLLLVYQTT
RYFATFGFPE SVFYFFEKLG PPYQRAFALR TFFILGAMGA FAAALMLALA ALAPQVLRSW
EPGPLATLRQ LLPWLALVAV LEIPTWPMNN VLLALDRQKA ASWYQMLTSA GSFVALVVPV
LLGAEISVAI YGLVIFAVAR FAVTVVWFQL VLPGPSAPLA PGTLREQVRF AVPLGLNALS
SRVNKYLDKF VVSVMLPVAA FAEYQVGGQE LPLITAIPYG VGSVFISRFV ALHLAGDREG
LLALWYRGIE GVSLVVVPVA MLFVVVAHDF ITLVFGAEYA PAVLPFQIYT LILLHRVTQY
SAILQAHADT ASILRFTMIS LLSNLVLSVP LTWLLGLSGP ALATLLSALV TWYVYLKRIG
VHLGVGLGAV FPWAYYGKVV GVAAVAGAVC WGLRYLVLDE LPQMLALSIA TAAFLLVYAA
LGALARVIDR SHWRILGGWV RLRFLWR
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