| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3122 |
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| Symbol | |
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| ID | 8545510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4296079 |
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| End bp | 4297701 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387789 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003267517 |
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| Protein GI | 262196308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.340394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.912648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG AGCGCACCGA ACTAGAGATT GTCCGTCAAC AACTAGCAGA GGCTCACGCC
ACGCTCGATG CCATCCGCTG CGGCGAGGTC GACGCGGTGA TGGTCGATAC CGGTGACGCC
CACGAGGTGT TCACGCTTCA GCCCGCCGAT CTGCCGTATC GCGAGTTTCT CGAGCGCATG
GCCGAGGGCG CGCTGTCGCT CGACGCCGAT GGTCTGGTGC TGTACTGCAA CCAGTTTTTG
TGCGGGCTGC TGGGCCTGGG GCGTGAGCAG CTCACCGGCC GGCCCTTCTC CTCGTTTGTC
CTCGAGGGCT CGCGCTCCGA GTTCGAGGCC GCGCTGGCGG CCAGCGACAG CGGCAGCGTG
GCCGTGACCC TGCGCGGCGC CGGCGAGCGC CGTGTGCCCG TGCTGCTCAG CTACACGCCG
GTGGGCGGCG GCGAGCGCCG GCGCACCAAC CTGGTGGTCT CCGATCAGCG CATCCGCCGG
CGGCTGCAGA CCGTGAGCGC GGCCCGCGAC GCGGCCGAGG CCGCGAGCAC GGCCAAGGAC
CGCTTTCTGG CCGTGCTCGG GCACGAGCTG CGCAATCCTC TGGCCGCGCT CACCAGCAGC
GTCGAGCTGC TCGCGCACGG CGCGATCGAC GACCAGCGGC GCGACTGGAT CCACGACAGC
ATGGCGCGTC AGCTCGCCCA GCTCCGCTCG CTGGTCGACG ACCTGCTCGA CGTCACCCGC
ATCGCCCAGG GCAAGATGGT GCTGCGCAAG GCGCCGGTGG ACATCGCCAG CGTGGTCGCC
GACGCCCTCG AGTCGGTGTC CTCGCTGGTC AACGCGCGCA AGCACACGCT GGTGTGCGAG
CCCATCGTCG AGCGTCTCGA GGTGTTTGGC GACCGCACCC GGCTCGAGCA GGTGATCGTC
AACCTGGTGG CCAACGCCGC CAACTACACC GAACCCGGCG GCCGCATCGA GCTCAGCGCC
AGGCGCGAGG GTGAGCACAT CCGCGTCGCG GTGGTCGACA CCGGCGTCGG CATCGACGCC
GCCGACATCG AGCACATCTT CGAACCCTTT GCCCAGGTCG GCGAGGCCGG CAGCGGCGGC
CTAGGCATCG GCCTCACCCT GGTGCGTCAG CTCGTCGAGC TGCACGGCGG CACGGTCGAG
GCCGAGAGCG GGGGTCACGG CCAGGGCACG ACCTTCCGGG TGAGCCTGCC GCAGGGTGGC
GAGCAGCCGG CGCCGGAGCC CAGACCCAAC CCGGGCCAGC TCCCGCGCGG GCTGCGCGTG
GTGGTGGTCG ACGACAACGA GGACTCGGCC CAGCTCATGG CGCTGCTGCT CGCGGGCTAC
GGGCTCGAGG TCGAGAGCGT GCACCGCGGC ACCGAGGTGC TGCCCGCGGT CGAGCGCCAC
CGCGCCAAGC TGGTGCTGCT CGACCTCGGC TTGCCCGATA TCTCCGGCTA CGAGGTCGCC
CAGCAGCTCC GCCAGGCCGG CCACGACGAG CTGGTCATCG TCGCGCTCAC CGGCTTCTCG
CACGCCAGCG CCCGCCAGCG CGCCGAGCAG GCCGGCTGCG ACGCGCACGC GGTCAAGCCG
CTCAAGGCCG CCCAGCTCGC GACCATGGTG GCGCGCTTCC ACGAGCGCCT CAAGGTCGAC
TGA
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| Protein sequence | MSDERTELEI VRQQLAEAHA TLDAIRCGEV DAVMVDTGDA HEVFTLQPAD LPYREFLERM
AEGALSLDAD GLVLYCNQFL CGLLGLGREQ LTGRPFSSFV LEGSRSEFEA ALAASDSGSV
AVTLRGAGER RVPVLLSYTP VGGGERRRTN LVVSDQRIRR RLQTVSAARD AAEAASTAKD
RFLAVLGHEL RNPLAALTSS VELLAHGAID DQRRDWIHDS MARQLAQLRS LVDDLLDVTR
IAQGKMVLRK APVDIASVVA DALESVSSLV NARKHTLVCE PIVERLEVFG DRTRLEQVIV
NLVANAANYT EPGGRIELSA RREGEHIRVA VVDTGVGIDA ADIEHIFEPF AQVGEAGSGG
LGIGLTLVRQ LVELHGGTVE AESGGHGQGT TFRVSLPQGG EQPAPEPRPN PGQLPRGLRV
VVVDDNEDSA QLMALLLAGY GLEVESVHRG TEVLPAVERH RAKLVLLDLG LPDISGYEVA
QQLRQAGHDE LVIVALTGFS HASARQRAEQ AGCDAHAVKP LKAAQLATMV ARFHERLKVD
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