Gene Hoch_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3088 
Symbol 
ID8545476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4258376 
End bp4258675 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content60% 
IMG OID646387759 
ProductSterol-binding domain protein 
Protein accessionYP_003267487 
Protein GI262196278 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.54712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGG AAACCACTAC GCAGAACATC AAGGGCCGGG TCGGCGACGA CGCTGGTATC 
GACGCCACCC TGAAGTTCAA CCTGCAGGAT GACGGCGTCA TTTTCATCGA CGGCCGCTCC
AAGCCGAACA CTGTGTCCAA CGAGGACAAG GACGCCGAGT GCACCATCAC CATGGAGCTT
GCGGACCTCG AGGCCATGCT CAACGGCGAC CTCGATCCCA TGAGCGCGTT CATGGGCGGC
AAGCTCTCGG TCGATGGCGA CATGGGCGTC GCCATGAAGC TGCAGTCCCT GGTTAGCTAG
 
Protein sequence
MSLETTTQNI KGRVGDDAGI DATLKFNLQD DGVIFIDGRS KPNTVSNEDK DAECTITMEL 
ADLEAMLNGD LDPMSAFMGG KLSVDGDMGV AMKLQSLVS