Gene Hoch_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3025 
Symbol 
ID8545413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4185324 
End bp4185662 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content63% 
IMG OID646387696 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003267424 
Protein GI262196215 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.361179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.13274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCT CCAAAGATTT CGTCGCAGCG TCGGCAGAGC CGTTGATCCT GTCGATCCTC 
GCGCAGGACG ACAGCTACGG TTACGCGATC ATCCACACGG TGCGCGAGCT GTCGGACGGC
GAGATGGAGT GGGCGGACGG GATGCTCTAT CCGATTCTGC ATCGGCTGGA GAAGCGCGAG
CTGATCGAGT CGTATTGGGG GCGCGCGGAG ACTGGCCGGC GCCGCAAGTA CTACCGTCTA
TGCGACGCCG GACGCGAACA TCTGCTGGTG TTGCGCGCCA ACTGGCAGAG GCTCGAGCGC
ATGCTCGAGC AACTGGAACG AGGGAGTGCA AAGCGATGA
 
Protein sequence
MALSKDFVAA SAEPLILSIL AQDDSYGYAI IHTVRELSDG EMEWADGMLY PILHRLEKRE 
LIESYWGRAE TGRRRKYYRL CDAGREHLLV LRANWQRLER MLEQLERGSA KR