| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3023 |
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| Symbol | |
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| ID | 8545411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4180961 |
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| End bp | 4184764 |
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| Gene Length | 3804 bp |
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| Protein Length | 1267 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646387695 |
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| Product | serine/threonine protein kinase with WD40 repeats |
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| Protein accession | YP_003267423 |
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| Protein GI | 262196214 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.164436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGGCGG GGACCCGGAT CGGCCAGTAC GAGATCATCC GCCTCCTGGG GACCGGCGGC
ATGGGGGAGG TGTACCTTGC CCGCGACCTG CGTCTCGGAC GACTGGTCGC ACTCAAACTG
CTCAACGTGC GCAGCTCCGG GGAAAACGAG CAGTTCCTGA CCGAGGCGCG GACCACGGCG
CGCTGCACCC ACGAGAACAT CGTCGTGATC CACGACGTGG GCGAGCACGA TGGGTATCCC
TACATGGTGC TCGAGTTTCT CGAGGGACAG ACGATGCGGC AGTGGCTGCG CGACCGGTGC
AAGTTCGGGG GCCACGATGC CGCGATCTCG CCCGGACATG TGGTCGAGTT GATGCTTCCC
GTGGTACGCG CGCTGGTCTA CGCCCACGAG CAGGGGATCG TGCATCGCGA CCTCAAGCCC
GAGAACATCA TCCTCACCCG CGCGGGCGGG GTCAAAGTGC TCGACTTCGG GATCGCGAAG
GTGCTGGCCC CTGCGATTTC GTACGATGTG ACGAATCCCG AGATCGTAGT CTCGAGCGGC
GCGCTGCCGT ACATGTCGCC CGAGCACCGA AGCGAGCGCC CCACCGATCA CCGCACGGAC
GTGTGGGCCG TGGGCATCAT TCTGTTCGAG CTGGTGGCGG GCAAGCATCC GCTCGCGGGC
AGGTGGCACA CGCTGATGGC CATGGCTTGC GACGACGAGC CGATGCCGCG CGCGCGGGCG
CGATTTCCCC GCCTGGGGCC GCTCGCCGAC GTCATCGATC GCTGCTTGAT CAATGATCCC
GCGCATCGCA CGCCCAGCGC CCGCACGCTG CTGACCGAGC TTGAGGCTCT CAGCAGCCCC
GGCCGCGAGC CCCTGACGGC GCTGGCGGCG TTGCTCGAAT CCATTGCCAC CGGGCAGATG
GATACGCGGC CGGCTGACGA CGCCGGCGGT GACGCCGACG GCGGACGAGC GGACGAATCA
GGCCGCGGCC TGGACATCAC CACCGAGCGG CTGCGCGCCG AGCCCGGCTA CCTGGGCGCC
CAGTTGCGCG CGCAGGCGTC GAGCAAGCTG CGCCGGGTGC TGGTGTTCGT CGATCAACTC
GAGGAGCTGT ACACGCTGGG CGCGCCCGCG GCCGAACGCG CCGCGTATCT CAGTTGTCTG
GCCGCGGTGG CCGACGATCC CTCGTCGCCG CTGCGCGTGG TCGTCGCCAT GCGCTCGGAC
TTTCTCGATC GCCTGATCGA CGACCGGCGA TTCGAGGTCG ATCTCATCCG CGATCTGGTT
CTTCTCCCAC CCCTGGACCG CGACGGTATG CGCGAGGCGC TGCTCGAACC CATCCAGGCC
GTGAGCTACC AGTTCGAGCC GCTGACGCTG GTGGATCGGA TGGTGGAGGA AGTCGCGGCC
ACACCGGGAG CGCTGCCGCT GTTGCAGTTC GCGGCCTCGC GCCTGTGGGA GCGGCGCGAT
CGCAGGCAGC GCCTGTTGAC CGAGGCGAGC TACGAAAAGC TCGGCGGCGT CGCGGGCGCG
CTGGCCACGC ACGCCGACGC CGTGCTCGCG GGCATGTCCA CCGAGCAGGT GGCCTTGACC
CGCGAGGTCT TCAAGCGCCT GGTGACGCCC GAGCGGACCC GGGCGCTGGT GAGCGTGGAT
GAGCTGTATG CGCTCCACAG CGACGCCGAC CAGGTGGACG AGATCATCCA TCACTTGAGC
GCGATGCGGC TGCTGGTGGT GGAGCGCGAC AGCGAGGGCG ACGAACGCAC CGTGGAGCTG
GTCCACGAGT CGCTGATCGA GCGCTGGCCC AGGCTGGCGC GCTGGCTCGA CGAACACCAG
GACGACGCCG CGATGCTCAC GCGGCTGCGC AGCGCGGCGC GCGAGTGGGA GCGCAGCGGC
TCGGTGCTCG GCTTGCTGTG GACCGGGGCG GCCGCGGATG AGGCGCGCGC CTGGGAGCAG
CGCTACTGCG GCGAGCTGGC GCCGGCGCAG CGGCGCTATC TCGACGCGGT GCTGGACGCG
GCGACGCGTG CGCGACGGCG GCGACGGCGG CTGTTCAGCG GCGTGCTGGC GGTGGTGATG
GCGGCCGCGA TGGCCATGGG CTGGCTGGCC TGGCAGCAGG CCAACGCGAG CCGGGCCATG
GCTGCGGAGG CTGCGCGCGC GCGCGACGCC ACCCGCATGG CGGCGATTCG CGCGCTCGGA
AGCGACCCCA CCGCGCAGCT CGCGCTGCTG CGCGAGATCG AGGACACCGA CGAGCCACCG
ACCGGCGCGG CCGAAGAGGC CAAACATCTA TTGCACGCGG ACGTGGCCTC CGCGGTGTGG
ACGCCGCATG ACAATGTGGT GTCGACGGTG GCGTTCAGCC CCGATGGCAC GCGCCTCGTG
TCCGGGTCCT GGGACGGCAC CGTCCGCATG TTGCGCACCG ATGGCGACGG TACCTCCGTG
ACCGTGGGCG ACCACGGCGA GCGGGTCAAA TCGGTGGCGC TTAGCCCCGA CGGCATGCGC
GTTGCGTCGG CCTCGACCGA CTGGAGCGTG CGGATCTGGC GAGTAAACGG GGACGCCCCG
CCCGTGGTGC TTCGCGGCCA CGACGGGGTG GTGCGCTCGG CGGTGTTCAG CCCCGACGGA
AGTAAAATCG TCTCCGCGTC CGACGATAGG ACGGTGCGGG TGTGGAACGC AGATGGCAGC
GGCGAGCCCC TGGTCTTTCA CGGCCACAGT GACGTGGTCA CCGCGGTGGA TTTCAGCCCC
GACGGCCGCC GCATCGTCTC GTCCGATTGG GATCGCACGG TGCGGGTGTG GAACGCCGAC
GGCTCGGGCA CACCGATGGT GCTGCGCGGA CACACGGCCG CGGTCACATC TGTGCACTTC
AGCCCGGACG GACGCTTTAT CGCCTCATCG TCCGAAGACC GCACCGTGCG CATCTGGCAC
GCGGACGGCT CCGGTCAGCC GCGCATCCTC AGCGGACACG ACGCGGCGGT GATGGATGTG
CGCTTCAGCC CCGACGGCCG TTACATCGTC TCGGCCTCTG GCGACGCGAG CGTGCGGCTG
TGGAAGGCCG TCCGGGATGC CGAGCCGCTG GTGCTGCGCG GTCACGAGCA CGTGGTCACC
TCGGCGGATT TCAGTCCCGA CGGCCGCCGC GTGGTCTCGA CCTCCGAGGA CCAGACGGTG
CGGGTGTGGG ACGTCGCCAG CAGGAGCGAG CCGCTGGTTC TGCGCGGCCA CGAGGAGAGC
GTCATGTCGG CGGCCTTTAG CCCCGATGGC ACCCGTATCG TGTCGGCGTC CTGCGATCGC
ACGGTGCGGG TGTGGAACGC CGACGGCTCG GGCGAGCCCC TGGTCTTGTA CGGTCACGGC
AGCCGGGTGT GGTCGGCCGT GTTCAGCCCG GATGGGCGCC GCATCGCGTC CGGGTCCTGG
GACCGCACAG TGCGGGTGTG GAACGCCGAC GGCTCGGGTA CGGCGCTGAT TCTCAGCGGA
CACGAGGACT GGGTGTCCGA GGCCGAGTTC AGCCCCGACG GCGCGTATAT CGTCTCCGCG
TCCAAAGACC GAACGGTACG CGTGTGGCGC GCCGACGGCA GCGGCGGCGC CGTGGTCCTG
GGCGGACACT CCCTGTGGGT CAACGGAGCT CACTTCAGCC CCAATGGCGA GTGGGTCGTG
TCTCCCTCGG ACGATCGTAC GGTGCGCGTG TGGCGCGATC TCAGCGTGCC CCGGCTCGAC
GATCCGCGGC TGTGGACGGC GACCTCGTAT TGCATGTCGA TCGAGCGTCG CCAGGAGCTG
CTCGGGCTGC CCGAGGCCCT GGCGCGGCAG GGCCGCCAGC ATTGTCTGGC CCGCGTCGCC
GACGCCCGGA TGGCTAGCCG CTGA
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| Protein sequence | MEAGTRIGQY EIIRLLGTGG MGEVYLARDL RLGRLVALKL LNVRSSGENE QFLTEARTTA
RCTHENIVVI HDVGEHDGYP YMVLEFLEGQ TMRQWLRDRC KFGGHDAAIS PGHVVELMLP
VVRALVYAHE QGIVHRDLKP ENIILTRAGG VKVLDFGIAK VLAPAISYDV TNPEIVVSSG
ALPYMSPEHR SERPTDHRTD VWAVGIILFE LVAGKHPLAG RWHTLMAMAC DDEPMPRARA
RFPRLGPLAD VIDRCLINDP AHRTPSARTL LTELEALSSP GREPLTALAA LLESIATGQM
DTRPADDAGG DADGGRADES GRGLDITTER LRAEPGYLGA QLRAQASSKL RRVLVFVDQL
EELYTLGAPA AERAAYLSCL AAVADDPSSP LRVVVAMRSD FLDRLIDDRR FEVDLIRDLV
LLPPLDRDGM REALLEPIQA VSYQFEPLTL VDRMVEEVAA TPGALPLLQF AASRLWERRD
RRQRLLTEAS YEKLGGVAGA LATHADAVLA GMSTEQVALT REVFKRLVTP ERTRALVSVD
ELYALHSDAD QVDEIIHHLS AMRLLVVERD SEGDERTVEL VHESLIERWP RLARWLDEHQ
DDAAMLTRLR SAAREWERSG SVLGLLWTGA AADEARAWEQ RYCGELAPAQ RRYLDAVLDA
ATRARRRRRR LFSGVLAVVM AAAMAMGWLA WQQANASRAM AAEAARARDA TRMAAIRALG
SDPTAQLALL REIEDTDEPP TGAAEEAKHL LHADVASAVW TPHDNVVSTV AFSPDGTRLV
SGSWDGTVRM LRTDGDGTSV TVGDHGERVK SVALSPDGMR VASASTDWSV RIWRVNGDAP
PVVLRGHDGV VRSAVFSPDG SKIVSASDDR TVRVWNADGS GEPLVFHGHS DVVTAVDFSP
DGRRIVSSDW DRTVRVWNAD GSGTPMVLRG HTAAVTSVHF SPDGRFIASS SEDRTVRIWH
ADGSGQPRIL SGHDAAVMDV RFSPDGRYIV SASGDASVRL WKAVRDAEPL VLRGHEHVVT
SADFSPDGRR VVSTSEDQTV RVWDVASRSE PLVLRGHEES VMSAAFSPDG TRIVSASCDR
TVRVWNADGS GEPLVLYGHG SRVWSAVFSP DGRRIASGSW DRTVRVWNAD GSGTALILSG
HEDWVSEAEF SPDGAYIVSA SKDRTVRVWR ADGSGGAVVL GGHSLWVNGA HFSPNGEWVV
SPSDDRTVRV WRDLSVPRLD DPRLWTATSY CMSIERRQEL LGLPEALARQ GRQHCLARVA
DARMASR
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