Gene Hoch_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2716 
Symbol 
ID8545103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3739147 
End bp3740478 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content73% 
IMG OID646387409 
Productpeptidase U62 modulator of DNA gyrase 
Protein accessionYP_003267138 
Protein GI262195929 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.405721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.439475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC GCGAACGCGC CCAATCCATC GCCGACAAGG TCCTGTCGCT GTCCACGGCC 
GACGAGCTCC AGCTCGAGCT GTCCGAGCGC GAGGTCACGC ACCTGCGCTT TGCCCGCAAC
GCGCCCACGA CCAGCGGCAG CTACATCGAG CCCGCGCTCA CCGTGCGCAG CAGCTTCGGC
ACCCGCACCG GCTCGGTCAC CGCCAACCAG TTCGACGACG CCAGCCTGGC CGCGGCCGTG
GCCCGCGCCG AGGAGCTGGC CCGGCTGGCG CCCGAGGACC CCGAGCACAT GCCGGTGCTG
GGGCCGCAGG AGTATCCCGA GACCCCGGCC TTCGACAGCG CCACCGCCGA GCGCGGCGCC
GAGGGCCTGT TCGAGGGCGT GGCCGGCAAC CTCGAGCAGG CCGCGCGCGC CGGCGTCGAG
GCCGCCGGCT TCACCGAGAC CGTGGCCGAG GCCCGCGCCG TGGCCAGCTC GCGCGGCCTG
TTCGGCTACA GCCGCGCCAC CAGCGCCTAC CTCTCGGAGA CCGCGCGCCT GCCCGACGGC
AGCGGCTCGG GCTGGTCGAG CGCGGTCGAT CACCGGGTCG GCGCGCTCGA CTTCGCCGGG
GTCTCGCGCA CGGCCATCGC CAAGGCCAAG GCCTCCAAGG CGCCGCGGCC GCTGCCGCCG
GGCGAGTACC CGACCATCCT CGAGCCCGCG TGCGTGGCCA ACCTGGTGCA GATGCTGGCG
TGGATGCTCG ACACCCGCGC GGCCGACGAG GGCCGCAGCT ACTTCGCCGC GGGCGAGGGC
GGCAACCGCC GCGGCGAGGC CCTGTTCCCG GGCGATATCC ATATCTACTC CGACCCCGCG
GACGCGCTGG CTCCGGCCGC GCCCTGGGGT GAGGGCGGCA TGCCGCAGGC GCCCCGGACG
TGGATCGAGA ACGGCACCCT GGCCAACCTG CACAGCGACC GCTACTGGGC CGGCAAGCAG
AACATCGAGG CGATCCCGCC GCCGGCCAAC ATCATCATGC GCGGCGGCAA GGGCTCGGTG
GCCGACCTCA TCGCCGCCAC CGAGCGCGGC GTGTTGGTCA CCAGCCTGTG GTACGTGCGC
GGCGTGGACC CGCGCTCGCT GCTGTTCACC GGGCTCACGC GCGACGGCGT GTTTCTCATC
GAGGATGGCG CCATCGTCCA CCCGGTGCAG AACTTCCGCT GGAACGAGAG CATCATCCAC
GTGCTCAAGT CCGTCGAGGC CATGAGCGAG TCGGTGCGGG TGTCGCCGCG GCCGCAGCGT
TCGAACAACA TCGTCGTGCC CGCGCTCAAG CTGTCCTCGT TCCACTTCAC CAGCGTGTCC
GAAGCGGTGT AG
 
Protein sequence
MITRERAQSI ADKVLSLSTA DELQLELSER EVTHLRFARN APTTSGSYIE PALTVRSSFG 
TRTGSVTANQ FDDASLAAAV ARAEELARLA PEDPEHMPVL GPQEYPETPA FDSATAERGA
EGLFEGVAGN LEQAARAGVE AAGFTETVAE ARAVASSRGL FGYSRATSAY LSETARLPDG
SGSGWSSAVD HRVGALDFAG VSRTAIAKAK ASKAPRPLPP GEYPTILEPA CVANLVQMLA
WMLDTRAADE GRSYFAAGEG GNRRGEALFP GDIHIYSDPA DALAPAAPWG EGGMPQAPRT
WIENGTLANL HSDRYWAGKQ NIEAIPPPAN IIMRGGKGSV ADLIAATERG VLVTSLWYVR
GVDPRSLLFT GLTRDGVFLI EDGAIVHPVQ NFRWNESIIH VLKSVEAMSE SVRVSPRPQR
SNNIVVPALK LSSFHFTSVS EAV