| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2685 |
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| Symbol | |
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| ID | 8545072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3703731 |
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| End bp | 3705713 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387379 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003267108 |
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| Protein GI | 262195899 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.41147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.190122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAGT GTGAGGAACA GTCAGTCGAC GAGCATCTCT CGACCTTGGT CGAGATGATG
GACTCGGTCC CCGAAGCCGT GCTCGCGGTC GCGGCCTCCG GGCGCGTGGT ACTCGGCAAC
CGCGCGGCCC ATCGCCTGCT GGGCGCGGCG CTCACAGCGT CCGGGCCGCG TCTGCTCGAG
CTGTTTCAGC CGGCGAGCCC GGCTTCGACG GCCGCCGCGA GCGACCGCCG GAGCGACGCG
GAGGGCGCGG CCGATGCCCA GCCGCTGAGC GCGCTGTTGA CGCGCTTTGC CAGCGGACCG
GCGCAGCTCG TGGCGCCCAC CAGCCAGAGC GCCTCGGCGC AGCGCTTCGC GGTGCGCGCG
GTGCCCGTGC ACGGCAGCAG CGGCGCGGTG TGCGGCGCGG TGCTGAGCTT CCGCGCCGTC
GGCGTGATGT CGTGGCAGCT CCACGAGGCC GGCCGGATGC TGCAGACCGT GATCGACAAC
ATCCCGCAGT TCGTGTTCTG GAAGGACGCG CGCTCGGTGT ACCTCGGCTG CAACCGCAAC
TTCGCGCGCG CGGCCGGCGT GGCCCAGCCC GACGACATCG TCGGCAAGGT CGACAGCGAT
CTCGCCTGGC GCCCGGAGGA GGCCGAGCGC TTCGTGGCCG TGGACGCCCG CGTCATGAGC
ACCGGCGAGC CCGCCTACCG CCTGCTCGAG CCGCGGCGCC GAGCCGACGG CGTGCAGTCG
TGGGTGGAGA CCAACAAGCT CCCGCTGCGC GACGACGCCG GCGAGGTGAT CGGCATCCTG
GGCACCTTCG AAGACGTGAC CGAGCGCCGC GAGCTCGAGG AGCAGCTCCG CCACGCCCAG
AAGATGAAGG CCGTGGGCCA GCTCGCCGGC GGCATCGCCC ACGACTTCAA CAACCTGCTC
ACGGCCATCG CCTGCCACGC CGAGCTGGCC CAGCAGAGCG TCGAGAGCGG CAGCCCGGCG
GCCTTCGACC TCGAGCAGAT CATGCACGCC ATCCGCCACG CCGCCGAGCT CACCCAGCAG
ATCCTGGTGT TCTCGCGCCG GCGCGTCACC CAGCAGAAGC TGGTCCGCGT CAACGACGCC
GTGCTCGGTA TCAGCACCAT GCTGCGGCCG CTGATCCGGG CCAACTCCGA GATGATCACG
CTGCTGCGCG CGGGCGGCCA GGTGCGCATG GACGCGGGCG AACTCGAGCA GGTCATCGTC
AACCTGGTGG TCAACGGCAG CAACGCCATG CCCGAGGGCG GCAAGATCAC CATCGAGACC
GCAGACCTGG ACATCGGCAC CGGCGACGAG ACGCACGGGG TCGAGGTCTC GGCCGGCGCC
TACGTGAGCA TTTCTATCGA GGACACCGGC ACCGGCATGA CGGCCGAGGT CAAGGAGCGC
ATCTTCGAGC CCTTCTTCAC CACCAAGGGG CCGGGGGAGG GCACCGGGCT GGGCCTGGCC
ATCGTCTACG GCGTCATCAC CCGGGCCGGC GGCTACATCA CCGTCGACAG CGAGCCCGGA
CGCGGCACCC GCTTCTGCAT CCTGCTGCCG CGCGCCGAGG TCCAGGAGGA CGACGCGCCC
CTGCGGCCGA TCTCGTACAC GCCGCAGCCC GGCACCGAGA CCCTGCTGCT GGCCGAGGAC
GAGGCCGCGA TTCGCCACGT GACCGAGCGC ATCCTGGGCG AGCTGGGCTA CACCGTGCTG
TCGGCCAGCA ACGGCGAGCA GGCGCTGCGC ATGGCCACGG CCCACGGCCT CGACAAGATC
GACCTGGTGC TCACCGACGT GGTCATGCCG GTCATGGGCG GCACCGAGCT GGTCGAACGA
CTGCGCGAGC TGCGCCCCGA TATGCGCGTG CTGTTCCTCT CGGGCTACAC CGGGACCGCC
GGCATCGACC GCTTCCTGAG CGCCGACGCC GCGTTTCTGC AAAAACCCTT CACCTTCGAC
GTTCTCACCC GAAAGGTGCG CGAGGTGCTC GACGCACCCG CGCATCCGGC CGCGGCGCCA
TGA
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| Protein sequence | MSECEEQSVD EHLSTLVEMM DSVPEAVLAV AASGRVVLGN RAAHRLLGAA LTASGPRLLE
LFQPASPAST AAASDRRSDA EGAADAQPLS ALLTRFASGP AQLVAPTSQS ASAQRFAVRA
VPVHGSSGAV CGAVLSFRAV GVMSWQLHEA GRMLQTVIDN IPQFVFWKDA RSVYLGCNRN
FARAAGVAQP DDIVGKVDSD LAWRPEEAER FVAVDARVMS TGEPAYRLLE PRRRADGVQS
WVETNKLPLR DDAGEVIGIL GTFEDVTERR ELEEQLRHAQ KMKAVGQLAG GIAHDFNNLL
TAIACHAELA QQSVESGSPA AFDLEQIMHA IRHAAELTQQ ILVFSRRRVT QQKLVRVNDA
VLGISTMLRP LIRANSEMIT LLRAGGQVRM DAGELEQVIV NLVVNGSNAM PEGGKITIET
ADLDIGTGDE THGVEVSAGA YVSISIEDTG TGMTAEVKER IFEPFFTTKG PGEGTGLGLA
IVYGVITRAG GYITVDSEPG RGTRFCILLP RAEVQEDDAP LRPISYTPQP GTETLLLAED
EAAIRHVTER ILGELGYTVL SASNGEQALR MATAHGLDKI DLVLTDVVMP VMGGTELVER
LRELRPDMRV LFLSGYTGTA GIDRFLSADA AFLQKPFTFD VLTRKVREVL DAPAHPAAAP
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