| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2492 |
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| Symbol | |
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| ID | 8544879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3430426 |
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| End bp | 3431751 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646387192 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003266921 |
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| Protein GI | 262195712 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.265161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.958743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGT TGCAAACCAC CACACCTCGC GGCGCGTCTT CGGGCGCGCG CGCGATGCGC
TCCCTCCTTC TCGGGCTCGC GTGTGCAGCC GCGGCGCTCG CCGCGGGTTG CGGCGGCGGC
AGCAAGGCCG GCGCTGGCGG CGGCACCGGC CCGGGCGGCA CAGACGGCAG CGGCAGCGGC
GGCGCCGAGC GCGAGCTCTC GAGCGACGCC CGCGCCGACT ACGAGGTCGC GCTGGGCTAC
TTCAAGGAGC AGGACGCCGG CGCCTGGAGC CGCGACGCCT GCGAGCAGGC GGCGTCGAAG
TTCGAGGAGG TCGCCTCCGA CCATCCCAAG CTCATCGAGG CCCGCTACAT GCGCGCGCTG
TCCTACGACC GCTGCAGCAT GTCGGAGCAG GCCGAGGACG CCTACAAAGA CGTGCTCAAG
GCCAACAACG CGCACGCCTT GAGTATCTCC AACCTCGGCA CGCTGTACTT CAAGCGCGGC
GAGGTCGGCA AGGCCAAGGA GCACTGGGAG AAGGCGATCG ACACCGACAG TAAGATCGTC
GCGGCCCGCA ACAACCTGGC CTGGTTGCTG CTCGAGGACA TGCGCAAAAC CGACGATCAG
GCGACCTGGA AGAAGCTCGA AGAGGCCGCT TCCAAGCACC TGTCGAGCGC GCTCGCCGTC
AACAGCGAGC TGGTCGAGAC CTACGTGCTC TTCGGTCTGC TGTACCTCGA GGGCTCGGAG
CGCAACCGCA ACCGTCTGGA CCTGGCCAAC CTGCTGCTGG AGGAAGGCGA GAAGCGCAGC
GAGAACTACC CGCCGCTGTA CAACGCCCGC GGGCTGCTGC AGATGAAGCG CAACAACCTC
GGCGAGGCGC TGGCCAACTT CCAGAAGGCC GTGACCCTGG ACGAAAACTT CTCCGAGGCG
CGCGTCAACG TGGGCAACAT CGCCCTGGGC TTCCGCAAGT ACGAGGAGGC CGAGGCGCAG
TTCACCCAGG TGTTGGCGAA GGAGAAGCTG TACGAGGCGC AGCTCGGTCT GGGCATCGCG
CAGCGCGGCC TGGGCAAGCT CTCCGAGGCC GAGGACAGCT ACAAGAAGGC CATCGAGATG
GACGGCTCGC AGGGCGCGCC GTACTTCAAC CTCGGCGTGC TGTACAAGGA CTTCTACGCC
AACAAGGCCA GCGACCTGAA GGAGTCGAAG CAGGCTTACG AGACCGCTCG CGGCCACTTC
AAGACCTACC TGTCGAAGGG CGCCGAGAGC GCTGAGAACA AGCAGGAGGC CGAGGACAAC
ATCGCCGACT GCGACAAGAT CATCAAGCAG CTCGACGAGG TCATCAAGGC TACCGCGCAG
GGCTAG
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| Protein sequence | MNLLQTTTPR GASSGARAMR SLLLGLACAA AALAAGCGGG SKAGAGGGTG PGGTDGSGSG
GAERELSSDA RADYEVALGY FKEQDAGAWS RDACEQAASK FEEVASDHPK LIEARYMRAL
SYDRCSMSEQ AEDAYKDVLK ANNAHALSIS NLGTLYFKRG EVGKAKEHWE KAIDTDSKIV
AARNNLAWLL LEDMRKTDDQ ATWKKLEEAA SKHLSSALAV NSELVETYVL FGLLYLEGSE
RNRNRLDLAN LLLEEGEKRS ENYPPLYNAR GLLQMKRNNL GEALANFQKA VTLDENFSEA
RVNVGNIALG FRKYEEAEAQ FTQVLAKEKL YEAQLGLGIA QRGLGKLSEA EDSYKKAIEM
DGSQGAPYFN LGVLYKDFYA NKASDLKESK QAYETARGHF KTYLSKGAES AENKQEAEDN
IADCDKIIKQ LDEVIKATAQ G
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