| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2485 |
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| Symbol | |
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| ID | 8544872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3420897 |
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| End bp | 3421427 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387185 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_003266914 |
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| Protein GI | 262195705 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.423168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.175293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCG ACTCCTCGGA GTTTCTCGAG ATCGGCTACG TCGCTCGTCC GCACGGTATC
CGCGGTGAGC TGCGCGTGGT GACGCACGAG CCGAGCTCGA GCACGCTGCT GTCGGTCTCG
CGGATGGCGA TCGCCGACGC GGTGTACGAG GTCGCCAGCG TCAGGGCCGT GAGCGGTGGT
GGCAGCGCCG ATGGTGCGTT TCTGGTGCGT CTGCGCGGCC TCGGCGACCG CAACGCGGCC
GAGCTGCTGC GCGGCCGACC CGTGGGCGTG GCTCGCGACG AGCTGCCGCT CGAGGACGAC
GAGGTGTTCC TCGCCGATCT CGTCGGCTGC GCGGTCGTGC TCGAAGACGG CACCGCCTAC
GGCGTCATCG CCGCCATCGA CGCCGGCCCG CAGGATCGCC TGGTGATTCA CGACGGCGAG
GTCGAGCGCC TGCTGCCCCT GGTGTCCGAA TTCGTCCTCG ATGTCGATCT CGAGGCCGAG
CGGGTGGTGG TCGCCCCGCC CGAGGGCCTG CCCGAGAGTC CGCGGCGGTG A
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| Protein sequence | MARDSSEFLE IGYVARPHGI RGELRVVTHE PSSSTLLSVS RMAIADAVYE VASVRAVSGG
GSADGAFLVR LRGLGDRNAA ELLRGRPVGV ARDELPLEDD EVFLADLVGC AVVLEDGTAY
GVIAAIDAGP QDRLVIHDGE VERLLPLVSE FVLDVDLEAE RVVVAPPEGL PESPRR
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