| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2435 |
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| Symbol | |
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| ID | 8544821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3363566 |
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| End bp | 3365134 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646387134 |
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| Product | Thrombospondin type 3 repeat protein |
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| Protein accession | YP_003266865 |
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| Protein GI | 262195656 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03382] Myxococcales GC_trans_RRR domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.492834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCATC GTTCATACCG AGCTTCTCGT GATTCGTCTC TGACCTGCGG CCGCGCGTCC
CTGCGGCCGC GCGCGGTCTT CTTGGCGGCG CTCGCGCTGG CCCTGGTGGC CGGCGCCGGC
CTGGCTGGCG AGGCCCGCGC GCAGGTACCC ATCGAGTGTC CGGCGCCCGT GGATTGCGAC
GCGATCGGCG TCTGCGAGCT CGCCGACCTC AACTGCAACG GCATCCTGCG CTGTGATGAT
CCCGCCTCCG GCACCGTGGG CGAGGGCGAG TGCGTCGACG TGTGCGCGCA GGGGATCTGC
TCCACCGAGG TCCCCGATCG GCGCGCATGC GACGACTACT TCGACCCCGA GGGCGACGGC
GGCCAGTGCA CCACGGATCT GAACAACGCC GGTGTGGCCG ACAGCGACGG TGACTGCATC
GGCGACGCCT GCGACAACTG CATCGACATC AGCAACCTCG CCCAGCTCAA CCGCGATAAC
GACCTCTTCG GCAACGCCTG CGATAACTGC ATCGAAGTGC GCAACAACGA CCAGGCCAAC
GCCGACGAGG ATCTCTTCGG CGACGTCTGC GACAACTGCG TCGACGTCGC CAACGACGAC
CAGGCCAACA CCGATGTGGC CGCGGACGCG CCCGGCGACA GCTTTGGCGA CGCCTGCGAC
AACTGCGTCA ACGTCGCCAA TGAGGACCAG GCCAACGCCG ACAGCGACAA CTTCGGCGAC
GTCTGCGACA ACTGCGTCAA CGTCGCCAAC GATCAGGCCA ACGCCGACAG CGACAGCTTC
GGCGACGCCT GCGACAACTG CGCCGGTGTC GCCAACGAGG ACCAGCGCAA CTCCGACGCC
GAGATGGACC CGCCGGGCGA TGGCTTCGGC GACGTCTGCG ACAACTGCTT GATGGTCGCC
AACCCCGACC AGGCCGACAG CGACGGCGAC GGCCTGGGCG ATGCCTGCGA CCTGTGCCCC
GACGACGACA GCGACGTCGA CGACCAGGTC GACCAAGACG GCGACGGCCT CGGCGACCGC
TGCGACGTGT GCCCGAACGT GGCCAACGCC GTGGCCGATC CCGGCAATGG CATCGCCGGT
CAGCTCGAGT CGGATCGCGA GGATCCCGCG GACCCGAGCT CGGGTGACGG CTTCGGCGAC
GACTGCGACA ACTGCGCCCT GGTCCGCAAC CCGGATCAGG CCGATGCCGA CAACGACGGC
GTGGGCGACG CCTGCGACAT CTGCGTGAAC GCGGCCGATC CCGACCAGGC CGATGCCGAC
GGCGACGGCC TGGGCGACGC CTGCGACGTG TGTCCGAACA TCAGCGACGC CGACGCCCAG
ATCGACGGCG ACGGCGACGG CGTGGGCGAT GCCTGCGACA ACTGTCCGAA CACGCACAAC
CCGGACCAGC GCAAGTCCGA GCTGACGCGC GCCGATGGCA GCGAGCTCGG TTACGCTTGC
GAGCCCGGCA TCCAGGGCGC GGGCGGCTGC TCGGCCCATC CCGCGATGAA CGGCCCCGCG
GCGCCGGCCG CGCTGCTGGC GCTGCTGGCG CTGCTGGGCT TCGCGGCTAT CCGCCGCCGC
CGCAGCTGA
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| Protein sequence | MSHRSYRASR DSSLTCGRAS LRPRAVFLAA LALALVAGAG LAGEARAQVP IECPAPVDCD
AIGVCELADL NCNGILRCDD PASGTVGEGE CVDVCAQGIC STEVPDRRAC DDYFDPEGDG
GQCTTDLNNA GVADSDGDCI GDACDNCIDI SNLAQLNRDN DLFGNACDNC IEVRNNDQAN
ADEDLFGDVC DNCVDVANDD QANTDVAADA PGDSFGDACD NCVNVANEDQ ANADSDNFGD
VCDNCVNVAN DQANADSDSF GDACDNCAGV ANEDQRNSDA EMDPPGDGFG DVCDNCLMVA
NPDQADSDGD GLGDACDLCP DDDSDVDDQV DQDGDGLGDR CDVCPNVANA VADPGNGIAG
QLESDREDPA DPSSGDGFGD DCDNCALVRN PDQADADNDG VGDACDICVN AADPDQADAD
GDGLGDACDV CPNISDADAQ IDGDGDGVGD ACDNCPNTHN PDQRKSELTR ADGSELGYAC
EPGIQGAGGC SAHPAMNGPA APAALLALLA LLGFAAIRRR RS
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