Gene Hoch_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2416 
Symbol 
ID8544802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3343120 
End bp3344349 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content63% 
IMG OID646387115 
Producthypothetical protein 
Protein accessionYP_003266846 
Protein GI262195637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.039677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.33337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTG GACACAACAT CACTGTTCCC GCCGACGCAG ACATCCGAAT GGGTGGCCTG 
TCGGGCAAGA TCTCGAAGGT CGCGCTGCCG GTCGGCATCA TCCTGCTCAT CGTCAGCGTC
GTGCTCGGCG CCAGCGTCGG TGAGCATTTC GACCGCTTCT TCCACGGCTA CCTGGTCGCG
CTCACCTATT GGCTGAGCGT GGCCCTCGGC GGCCTGTTCT TCATCATCCT GCAGCCGCTC
ACGCGCTCGC GGTGGAGCCC GGTGGTCCGG CGTCTGGCCG AGATCATCGC CAACTCCATC
CCGCTGCTGT TCGTGATGGC GCTGGCCGGC ATCATCGTCC CCATGCTCGC CGGCTCCTCG
GGTCCGTATC ACCACTGGGT GCACCCGGAT CCCAACGACC ACATCCTGCA CGGCAAGCAC
GCGTGGCTGA ACGTGCCCTT CTTCTGCGCT CGCATAGCCG TGTACTTCCT GGCCTGGGGC
GCGCTGGCCC GCTACTTCTT CAAGAAGTCG CTGGCCCAGG ACGAGAGCGG CGACGCCGAG
ATCAGCGAGC GCCTGCGCGT CGCCTCGGCG CCCGCCATGC TGCTGTACGC GATCACCGTG
TGTTTCGGCG CCTTCGATCT GCTGATGTCG CTCGACCCGC ACTGGTTCAG CACCATCTTC
GGCGTCTACT ACTTCGCCGG CTGCGTGCTG TCGATCTTCG CCTCGCTGAT CCTCGCGTCG
CTGTTCCTGC AGCGCTGCGG CAAGCTCAAG GACGTGATCA CCACCGAGCA CTATCACGAC
ATGGGCAAGT TCCTGTTCGC GTTCGTGTTC TTCTGGAGCT ACATCGCGTT CTCGCAGTTC
ATGCTCATCT GGTACGCCAA CATCCCCGAG GAGACGGTCT GGTACCAGCC GCGCATGTTC
ACGAGCTGGA GCGCTATCAG CCTGGTGCTG CTTTTCGGAC ACTGCGTCTT CCCCTTCATC
TGCCTGCTGT CGCGCTGGAC CAAGCGCTGG ACCAAGCTGC TGGCCTTCTT CGCCATCTGG
CTGCTGGTCA TGCACTACGT CGATCTCTTC TGGCTGGTGA TGCCGCAGCT CACGCCCGAG
GGCTTCTCCT TCCATCCCAT GGACATCACC TCGCTCCTCG GTATGGGCGG CCTGTTCGTG
TGGTGGAACG CGCGCACGGC CAGCAAGGTC AATCTCATCC CCACCAAGGA CCCGCAGCTC
GGTAACTCGC TGCACCTCGA GAACTTCTAG
 
Protein sequence
MSPGHNITVP ADADIRMGGL SGKISKVALP VGIILLIVSV VLGASVGEHF DRFFHGYLVA 
LTYWLSVALG GLFFIILQPL TRSRWSPVVR RLAEIIANSI PLLFVMALAG IIVPMLAGSS
GPYHHWVHPD PNDHILHGKH AWLNVPFFCA RIAVYFLAWG ALARYFFKKS LAQDESGDAE
ISERLRVASA PAMLLYAITV CFGAFDLLMS LDPHWFSTIF GVYYFAGCVL SIFASLILAS
LFLQRCGKLK DVITTEHYHD MGKFLFAFVF FWSYIAFSQF MLIWYANIPE ETVWYQPRMF
TSWSAISLVL LFGHCVFPFI CLLSRWTKRW TKLLAFFAIW LLVMHYVDLF WLVMPQLTPE
GFSFHPMDIT SLLGMGGLFV WWNARTASKV NLIPTKDPQL GNSLHLENF