| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2397 |
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| Symbol | |
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| ID | 8544783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3319231 |
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| End bp | 3320532 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646387096 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_003266827 |
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| Protein GI | 262195618 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.344287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.614956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGC ACAAGCCATT TCGCGAGCTA ATCAAGCCCG GCAGCAACTT TGAGTTCGTG
GGGCGTACCC GGGTATGGGT CATGCTGTCG ATCGTTCTCA TCGCCGCCAG CATCGGTATG
TTGTTCGTCA ACAACGCGAT GCGCGGCAGC ATGCTGAACT GGACCATCGA CTTCAAAGGC
GGCACCGAGG TCATCTTCGC CTTCCGCGAC GCGGCCAGCG GTGCCCCGGC CAAGGTCGGT
GTCGGCGAGG TCCGCCAGTC CCTCGAGGGC GCCGGCTTCG ACGGCATCGA GGTGTCGGGC
TACTCGTTCA ACGAGGACCT GCCCAACGGC GAGTCGCGCG CGGTCGAGGG CATCCTGGTG
CGCACGCCGA CCTTCGGCGT GGCCGACGAG CAGGAGTCCG AGCAGATCCT CGATTCGTTC
GAGGAGCGCT TCGCCGACCG CGGGCTCACC AGCCTCACCT GGTCGGGCAA CCGCATCTAC
GTGCGGGCGC AGACGATGAT CACCGAGGCC GAGGCCTCGA CCTTCTTCTC CGAGCAGGGC
AAGGAGATGA AGCCCTGGGA CGAGGTTCAG AGCGAGCGCT TCTCGACCCT CAACCAGGCG
ATCGGTGTCT ATGAGCAGCA GTTCGCGGTG TGGGGTGTCG AGCGCCAGTT CGAGACCGCG
CTTGAGGCCT CGCTGCAGGA GCGCAACCTC GACGCCAGCC TGATCCAGTC GTGGGCGGTC
GGCGCGCGCG CCGGCGACGA GCTGCGCGAC GACGGCATCA AGTCGCTGTT CTACGCCATC
GCGCTGATCA TGCTGTATCT GGCCTTCCGC TTCGACGTGC GCTACGCGCC CGGCGCGGTG
GTCGCCTTGC TCCACGACGC GTTGCTGGTC ACGGGCGTGT TCGCGGTGAC CTGGACCGAG
GTGTCGCTCA CCAGCGTGGC CGCGTTGCTC ACCGTCATCG GCTACTCGGT CAACGACACG
GTCATCATTT TCGACCGCAT CCGCGAAAAC GCCGAGCGCC TCAAGGACAA GCGCCTCGAG
CGCGTGGTCA ACATCTCGCT CAACGAGACC CTGTCGCGTA CGCTGCTCAC CTCGCTGACC
CTGTTCGTGG TCACGGTGAT GATGAACGTG TTCGGCACCG GCGAGGTCGC CAACTTCGCC
TTCGCCATGA ACATCGGCGT CATCGTCGGT GTGTACTCGT CGATCTTCGT CGCCTCGCCG
ACGCTCATCT ACCTCGACAA GAAGTTCTAC GGCGGTAGCG GCAAGTCGTC CAAGAAGGGC
GGCGCGAGCA ATACCAAGAC CAAGGCCAAG AGCGAGAGCT AA
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| Protein sequence | MATHKPFREL IKPGSNFEFV GRTRVWVMLS IVLIAASIGM LFVNNAMRGS MLNWTIDFKG
GTEVIFAFRD AASGAPAKVG VGEVRQSLEG AGFDGIEVSG YSFNEDLPNG ESRAVEGILV
RTPTFGVADE QESEQILDSF EERFADRGLT SLTWSGNRIY VRAQTMITEA EASTFFSEQG
KEMKPWDEVQ SERFSTLNQA IGVYEQQFAV WGVERQFETA LEASLQERNL DASLIQSWAV
GARAGDELRD DGIKSLFYAI ALIMLYLAFR FDVRYAPGAV VALLHDALLV TGVFAVTWTE
VSLTSVAALL TVIGYSVNDT VIIFDRIREN AERLKDKRLE RVVNISLNET LSRTLLTSLT
LFVVTVMMNV FGTGEVANFA FAMNIGVIVG VYSSIFVASP TLIYLDKKFY GGSGKSSKKG
GASNTKTKAK SES
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