| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2394 |
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| Symbol | |
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| ID | 8544780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3315652 |
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| End bp | 3316755 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387093 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_003266824 |
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| Protein GI | 262195615 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.311868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA CCGACGGTTT TTCGTTCGAG ATCCTGGCCC GCGCCGGCAA CGCGCGCGCC
GGCGTGCTGC ACACCCCGCA CGGCGACATC CCCACGCCCG TGTTCATGCC CGTGGGCACC
CTGGGCACGG TCAAGGCCAT GACCGCGCGC GAGCTGTGCA CCCCGCCGCT CGACGCGCGC
ATCATCCTCG GCAACACCTA TCATCTGTAT CTGCGCCCCG GCCTCGATGT GCTGCGCGCC
CACGGCGGCC TGCACGGCTT CGCCGGCTGG CAGCGGCCGA TCCTCACCGA CTCCGGCGGC
TACCAGGTGT TCAGCCTGGC CCGCCTGGGC GCCATCGACG ACGAAGGCGT CACCTTCCAG
AGCCACATCG ACGGCACCCG CCACCGGCTC ACGCCCGAGC TGTCGATGGA GATCCAGGGC
GTGCTGGGCT CGGACATCGC CATGGTCTTC GACCAGTGTC CGCCCGGCGA CGCCGACGAC
GCGCTGCATG ATCTGGCGAT GAAGCGGACC ACGGCCTGGG CCGAGCGCTG CCAGCGCGTG
AGCCGGCCGC CGGGACAGGC GCTCTTCGGC ATCGTCCAGG GCGGCGTCGA CGTCGAGCGC
CGGCAGCGCC ACCTCGAGCA GCTCGTGCCG CTCGACTTCG ACGGCTACGC CATCGGCGGT
CTCAGCGTGG GCGAGCGCAA AGAGGATATG TACCGGGTGC TCGACGCGTT TGCCCATCGC
ATGCCCGATG ACAAGCCGCG TTATCTGATG GGGGTGGGCA CGCCCGAGGA CCTGGCCACC
GGCGTCGCCG CCGGCGTCGA CATGTTCGAT TGCGTCATGC CCACGCGCAA CGCCCGCAAC
GGCACGCTGT TTACCTCGCA GGGCAAGGTC AACATCAAGG CCAGCAAGCA CAAGAGCGAC
ACCGGGCCGC TCGACCCCGC GTGCCCTTGC GAGACCTGCG CCACGGTGTC GCGCGCCTAC
CTGCGTCATC TGTATTTGGC GCGCGAGATT CTCTTCAATC GGTTGGCCAC CCTACACAAC
CTGGTATTCT ACGCCGAGAC GATGAGACGC TTGCGCCGGT CCATCCTGGA GGGCGCTGAA
GTCGGGTCGC GCGAGCGCCC TTGA
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| Protein sequence | MQQTDGFSFE ILARAGNARA GVLHTPHGDI PTPVFMPVGT LGTVKAMTAR ELCTPPLDAR
IILGNTYHLY LRPGLDVLRA HGGLHGFAGW QRPILTDSGG YQVFSLARLG AIDDEGVTFQ
SHIDGTRHRL TPELSMEIQG VLGSDIAMVF DQCPPGDADD ALHDLAMKRT TAWAERCQRV
SRPPGQALFG IVQGGVDVER RQRHLEQLVP LDFDGYAIGG LSVGERKEDM YRVLDAFAHR
MPDDKPRYLM GVGTPEDLAT GVAAGVDMFD CVMPTRNARN GTLFTSQGKV NIKASKHKSD
TGPLDPACPC ETCATVSRAY LRHLYLAREI LFNRLATLHN LVFYAETMRR LRRSILEGAE
VGSRERP
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