| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2304 |
|---|
| Symbol | |
|---|
| ID | 8544690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3206010 |
|---|
| End bp | 3208085 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646387009 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_003266740 |
|---|
| Protein GI | 262195531 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.280506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACT CGGATCGCCG TTCTTCTCAG ACTCCGTCAC GTGCCGCGCC CTCGGCGCTG
GCGTTCACGC TGGACGATGT GCGCCGGCTG GTCAGCGAAG ACGCGCGCTT CGCCCACGTC
CGCCTGGTCA GCGGCGAGCG CGAGCTGGCC GCGGGCGCGC TGGAGCTGTC CAGCGGCGAC
AAGGCGGCCG TGCTGCTGTG GCCGGCGATG TGGCGCGACG CCGACCACCT GGCTCCCTTC
CTCTCGCGCG CCCGCGCCAG CGCCTGCGCG CTGCTGTTCT TCGGCACCGA GGAGCAGCTC
GCCGACAGCA TCCTCGAGGA GCTGGGCACC ATCCACGCCG TGCCCATGCC GCTGCCGGTG
TCGGCCTCGC GCATCGCGAT CACCGTGCGC CACGCCCTGG CCGCGCTGGA GCTAGCCGGC
GATCGCTCGG TGCTTGCGGT GTCGCTCGAG CGCGCCCGCT ACGAGAACGA GATGCTGATC
TCGATCGGCC GGGCGCTGTC GCAGCAGCGC GATCTGCGCT CGCTGCTCGA CATCATCCTG
CGCCGCGCGC GCGAGGTGAG CGGCGCAGAT GCCGGCTCGA TCTACGTGGT CGAGGGCGAG
GACGACGAGG ACGACCGCAA GCTGCACTTC AAGGTCGCGC AGAACGACTC GGTGGAGGCC
ATCGAGACCG AGACCACGGG CTTCACCATG CCGGTCTCGG ACTCGTCGAT CGCGGGCCTG
TGCGTGCTCA CGGGCGACGA GATCAACATC ACCGACCTGT ACGCGCTGGA CCCGCCGGGC
ACGGGCAATA ACCCGTGGGG CTTCGTCCAC GACCGCAGCT TTGACGAGCG CCACGGCTAC
CAGACCCGCT CGATGCTCAC GGTGCCGATG ATCTCGGCGC GGCAGCAGGT CATCGGCGTC
ATTCAGCTCA TCAACAAGCG CGCGATGGGC GTCGGCTCGC TGTGCGCGCG CGACTCGTTT
CAGCGCGACG TCGTCGCCTT TGACGACGTG TCCGTGGATT ACACCAAGTC GCTGGCCTCG
CAGGCCGGCA TCGCGCTCGA GAACGCGATG CTGCACGACG AGGTGACCAC GCTCTTCGAG
GGCTTCGTGC GCGCCTCGGT GACCGCGATC GAGGCCCGCG ACCCGACCAC CTCGGGTCAC
TCCGAGCGCG TCGCCCGGCT CACGGTGGGC CTGGCCAAGG TGGTCGACCG CGAGTCCGCG
GGCCGCTACG CCGAGCTGCG CTTCACGGCC GACGAGCTCA CGCAGCTCGA GTACGCGGCG
CTGCTGCACG ATTTTGGCAA GGTCGGCGTG CGCGAGCACG TGCTGGTCAA GGCCGACAAG
CTGTACCCGC AGCAGCGCGA GCTGATCGTC CAGCGCTTCG CGTTCATCAA GAAGACGCTG
CAGAACCAGG TCTTGCAGCG CAAGGTGGAC ACCCTGCTGC AGGCCTCGCG CGAGGATATT
CTGGAGAACG CGAGCCCGGA CTCGGCGCTC GGGCGCGCGC TCGCCAGCCT CGATGGCGAT
CTCGACGTCC GGCTGTCCGA AATCGACGAG TTCGTGCGCT TTGTCATCGA GGCCAACCGG
CCCTCGGTGA TGGAGGCCGG CAGCTTCGAG CGCCTGGCCG ATATCGCGAC CAATACCTAT
CTCGACGACA CCGGCATCGA GCGGCCGTAT CTGGCGCCCA TCGAGGTCGA GGCCCTGGCC
GTGCTGCGCG GCTCGTTGAC CGCGGACGAG CGCATGGAGA TCCAGCGCCA CGTGGTCGAG
ACCACCAAGT TTCTCAAGCA GATCCCGTGG AGTCGCGGGC TGCGCCAGAT CCCCAAGATC
GCGGGCGCGC ACCACGAGAA GCTCGACGGC AGCGGCTACC CCGACGGCCT CAGCGGCGAC
GCCATCGTGC CGCCGGCGCG GATGATGGCC ATCGCCGACA TCTACGACGC GCTCACGGCT
GCCGACCGAC CGTACAAAAA AGCCGTCCCG GTCGAGCGCG CGCTCGATAT TCTGGGCATG
GAAGTGCGCC AGGGACGACT GGACGAAGAC CTGTTCAAGC TGTTCGTCGA CGCCAAGGTG
TACGAGGCCA CCCGCCGCTG GCGCAAGCCG CGCTGA
|
|---|
| Protein sequence | MQHSDRRSSQ TPSRAAPSAL AFTLDDVRRL VSEDARFAHV RLVSGERELA AGALELSSGD
KAAVLLWPAM WRDADHLAPF LSRARASACA LLFFGTEEQL ADSILEELGT IHAVPMPLPV
SASRIAITVR HALAALELAG DRSVLAVSLE RARYENEMLI SIGRALSQQR DLRSLLDIIL
RRAREVSGAD AGSIYVVEGE DDEDDRKLHF KVAQNDSVEA IETETTGFTM PVSDSSIAGL
CVLTGDEINI TDLYALDPPG TGNNPWGFVH DRSFDERHGY QTRSMLTVPM ISARQQVIGV
IQLINKRAMG VGSLCARDSF QRDVVAFDDV SVDYTKSLAS QAGIALENAM LHDEVTTLFE
GFVRASVTAI EARDPTTSGH SERVARLTVG LAKVVDRESA GRYAELRFTA DELTQLEYAA
LLHDFGKVGV REHVLVKADK LYPQQRELIV QRFAFIKKTL QNQVLQRKVD TLLQASREDI
LENASPDSAL GRALASLDGD LDVRLSEIDE FVRFVIEANR PSVMEAGSFE RLADIATNTY
LDDTGIERPY LAPIEVEALA VLRGSLTADE RMEIQRHVVE TTKFLKQIPW SRGLRQIPKI
AGAHHEKLDG SGYPDGLSGD AIVPPARMMA IADIYDALTA ADRPYKKAVP VERALDILGM
EVRQGRLDED LFKLFVDAKV YEATRRWRKP R
|
|---|
| |