| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2135 |
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| Symbol | |
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| ID | 8544521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2959632 |
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| End bp | 2961995 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646386842 |
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| Product | DNA topoisomerase (ATP-hydrolyzing) |
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| Protein accession | YP_003266573 |
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| Protein GI | 262195364 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGA AGCGACGACG CTCCAAGAAG TCCTCCAAGA GCGACGCCCC CAGCGGAACC
GACGACTACA TGGGCGGAGG CGAACTCGAC GCCTCGCTCC AGGCCGAGGC CCGGCGCCGC
TACCTCAACT ACGCGCTGAG CGTCATCACC GCGCGCGCCC TGCCCGACGT GCGCGACGGC
CTCAAGCCGG TGCAGCGGCG CATCCTCTAC GCCATGCAGG CCGACGAGAA GCTGTCGCAC
GAGGCCAAAC ACAAAAAGAG CGCCAAAGTC GTCGGCGCCG TCATCGGCCG CTATCACCCG
CACGGCGACA CCGCCGTGTA CGACGCCATG GTGCGCATGG CCCAGCCCTT CTCGCTGCGC
CTGCCCCTGG TCGACGGCTC GGGCAACTTC GGCTCCCTCG ACGGCGACAG CCCGGCCGCC
TACCGCTACA CCGAGGCCCG GCTCACGGCC GCCGCCATGC AGCTCCTCGA CGAGCTCAAG
TACGCGACCG TGCCCTTCCG CGCCAACTAC GACGCCACCG CCGAAGAGCC CACGGTGCTG
CCGGCGCGCT TCCCCAACCT GCTGGTCAAC GGCTCCACCG GCATCGCCGT GGGCATGGCC
ACCAACATCC CGCCGCACAA CCTGCGCGAG CTCACCAAGG CGCTGATCGC CCTCGCCGAT
GACCCCGAGC TGAACGTGAG CGGGCTGCTC AAGTACATCA AGGGCCCCGA CTTCCCCACG
GGCGGCCAGA TCCTCAACAG CAAGGCCGAG CTGCGCGAGA TCTACGAGGA GGGCCGCGGC
GCCATCCGCG TGCGCGGCGA ATACAAGCTC GAGACCCAGA AGCGCAGCAA GATCCTGGTC
GTGACCTCGG TGCCCTACGG CGTCACCAAG GCCACCGTGG TCGAGCGCAT CGCCGAGGTC
ATCATCAAGC GCAAGCTGCC GCAGCTCCTC GACGTGCGCG ACGAGTCGAC CACCGACGTG
CGCGTCGTGC TCGAGATCAA GAAAGACGCC GATCCCGAGA TGATCATGGC GTACCTGTTC
AAGCACACGC CGCTGCAGCT CAACTTCAAC GTCAACCTCA CCTGCCTGGT GCCGAGCGGC
AACGACGCCA GCCAGCCGGC CCAGCTCGGG CTCAAGGACA TGCTGCGCCA CTTCCTCGAC
TTCCGCTACG AGGTCACCGA GCGCCGCTAC CAGTTCGAGC TGGCCGCCCT GCTGCGGCGC
ATCCACATCC TCGAGGGCTT CGTGGTCATT TTCGACGCCC TGGACGAGAC CATCCGCATC
ATCCGCCGCA GCGACGGCCG CCAGGACGCG GCGCAGAAGA TCATGAAGAA GTTCGGCCTC
GACAAAGAGC AGGTCGACGC CATCCTCGAG CTGCGCCTGT ATCGCCTGGC CAAGCTCGAG
ATCAACATCA TCCGCGAAGA GCTGGCCGAC AAGCGCTCGC AGGCCAAGAG CATCGAGGCC
ATCCTGCGCA GCGAGAAGAA GCTCTGGGGC GTGGTCAAAA CAGAGCTCGG CGAGGTCGCC
GAGCTGCTCG GCGACGCGCG CCGCACCAAG ACCGGCGGCG CCGCGGCCGA GCTGGAGTTC
GACGCCGACG CCTACATCAT CGACGAAGAC GCCCACGTGG TGCTCACGCG CGACGGCTGG
CTCAAGCGCC AGCGCGAGCT CAAGGACCCG ACCAGCACCC GCCTGCGCGA GGGCGACGAG
GTCATGGCCG TGCTCGCCGG CTCGACCAAG GAACACGTCG CCTTCTTCAC CAACTACGGC
TCGGCCTACG TCATCAAGAT CTACGACGTG CCCGCGACCT CGGGCTACGG CGACCCGGTG
CAGAAGCTGT TCAAGTTCAA AGACGGCGAG CGCATCGTCG CGGCCATGGC CTTCGACCCG
CGCGCCATGC CGCCCGACGA GCTGCTCACG GTCAGCTCCG GCGGCTTTGG CCAGCGCTTC
GCGTCCGAGC CCTTCACCCA GCCGACAACG CGCGCCGGGC GCAAGTTCGC GCGCCCGCCC
AAGGGCGACG AGATCGTCGA CGTGGTCGCC ACCGAGGAGG ACGACATCGT GGTCGTGGCC
ACGCGCAAGG GCTACACCCT GGCGTGCCGC TCGGGCGAGA TCAACAAGCT CGAGAACCCG
GGCAAAGGCG TCACCGTCAT CAAGACCGGC GAGCACGACA AGGTCATCGG CTTCATCTCC
GGCGGCCGGC GCGCCGAGGC CCTGTACGTC GAGAGCGCCA AGGGCGGCCG CACCTTCGAG
CTGCACGCCG TGGCCCAGCG CCTGACCACG CGCGGCGGCA AGGGCCACCA GCTCGTCAAG
CGCTCGACCC TCAAGCTCAC CCCGCAAACG GCCGAGCTGC CGCCGCCGCT GGCCAACAAC
GAAGGCAACA AAGAGGTCCA CTGA
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| Protein sequence | MATKRRRSKK SSKSDAPSGT DDYMGGGELD ASLQAEARRR YLNYALSVIT ARALPDVRDG
LKPVQRRILY AMQADEKLSH EAKHKKSAKV VGAVIGRYHP HGDTAVYDAM VRMAQPFSLR
LPLVDGSGNF GSLDGDSPAA YRYTEARLTA AAMQLLDELK YATVPFRANY DATAEEPTVL
PARFPNLLVN GSTGIAVGMA TNIPPHNLRE LTKALIALAD DPELNVSGLL KYIKGPDFPT
GGQILNSKAE LREIYEEGRG AIRVRGEYKL ETQKRSKILV VTSVPYGVTK ATVVERIAEV
IIKRKLPQLL DVRDESTTDV RVVLEIKKDA DPEMIMAYLF KHTPLQLNFN VNLTCLVPSG
NDASQPAQLG LKDMLRHFLD FRYEVTERRY QFELAALLRR IHILEGFVVI FDALDETIRI
IRRSDGRQDA AQKIMKKFGL DKEQVDAILE LRLYRLAKLE INIIREELAD KRSQAKSIEA
ILRSEKKLWG VVKTELGEVA ELLGDARRTK TGGAAAELEF DADAYIIDED AHVVLTRDGW
LKRQRELKDP TSTRLREGDE VMAVLAGSTK EHVAFFTNYG SAYVIKIYDV PATSGYGDPV
QKLFKFKDGE RIVAAMAFDP RAMPPDELLT VSSGGFGQRF ASEPFTQPTT RAGRKFARPP
KGDEIVDVVA TEEDDIVVVA TRKGYTLACR SGEINKLENP GKGVTVIKTG EHDKVIGFIS
GGRRAEALYV ESAKGGRTFE LHAVAQRLTT RGGKGHQLVK RSTLKLTPQT AELPPPLANN
EGNKEVH
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