| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2125 |
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| Symbol | |
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| ID | 8544511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2946861 |
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| End bp | 2948756 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646386832 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003266563 |
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| Protein GI | 262195354 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.536518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTC CTCAACCTCC GCCGCGGCGC GTGCCCGCGC TCGCCCCTCC TGCCGTCGTC
GCCGAGCGAC GCGACGATGG CGCGTTCGTG CTGCGCTCGC CGCAGCCGCT GCGCGCGCAC
GCGCCCACGC TCGGCCGCTG GCTCGAGCGC TGGGCGCGCG AGCGACCCGA TGCGGTCTTT
CTGGCCGAGC GGCCGAGTAG CCGCGCGCCC TGGCGCACGC TGGGCTACGC CGAGGCCCTG
GCCGGCGCCC GCGCCATCGC CCAGGCGCTG CTCGAGCGCG GCCTGTCGCT CGAGCGGCCG
GTGATGATCC TCTCGGGCAA CAGCATCGCG CACGCCCTGC TCACCCTCGG CGGCTACCTC
AGCGGCGTGC CCGTGGTACC GGTGTCCGAA GCCTACTCGC TGCGCAGCGC CGACCACGCC
CAGCTCCGCG GCGTGGCCGA GCTGGTCACG CCGGGCCTGG TGTTCGCGGC CAATGGCCAG
GCCTTTGCCC CGGCGCTGCG CGCGCTCGAC GCACGCGCGG GCCACGACGG CATCGAGATC
GTCACCGCAG ACGACACAGA CGCTGAGGGC GCCGAGAATG GGGCCGGCGG CGGCACCGGA
GCCACGCCGC TGTCGGCGCT GCTGGCCACC GCGCCCGGCG CCGCGCTCGC GGCCGCCTCG
GTGGGACCGG ACAGCGTGGC CAAGATCCTC ATGACCTCGG GCTCCACGGG CCGGCCCAAG
GGCGTGCTCA ACAGCCACCG CATGCTCACC AGCAACCAGG AAGCCCTGGC CCAGGTGTGG
CCCTTCATCG ACCAACAGCC GCCCGTGATC GTCGACTGGT TGCCGTGGTC GCACACCTTC
GGCGGCAACC ACAACCTGCA CCTGATCCTG CGCAGCGGCG GCACCATGTA CATCGACGGC
GGCCGCCCGC TGCCCGGCCG CTTCGACACC ACGCTCGAGA ACCTCGCCGA CATCGCGCCG
ACCCTGCAGT TCAACGTCCC GGCCGGCTAC GCCCTGCTGG TGCAAGCGCT CGAGCGCGAG
CGCGGCCTGC GCGAACACTT CTTCTCGCGC TTGCAGGGCA TCTTCTACGC CGCCGCCGCG
CTGCCGCAGC AGACCTGGGA CCGTCTCGAC CGCCTGGCCG AAGAAACCCT CGGCCACCGG
CTGTGGCTGA CCACCGCCTG GGGCGGCACC GAGACCTCGC CGCTGGTCAC ATCGGCGCAC
TTTCCCTCCG AGGACGCGGG CAACATCGGC CTGCCGGTTC CGGGCTGCGC CCTCAAATTC
GTCCCCGCCG GCGGCAAGCG CGAGCTGCGC GTCGCCGGCC CCAACGTCAC TCCCGGCTAC
CATCGCCAGT CCGAGCTCAC GGCCGCGGCC TTCGACGACG AGGGCTTCTA CCGCATCGGC
GACGCCGGCG AACTCGTCGA TGCCGAAGAG CCCGCGCGCG GCGTGCGCTT TGCCGGACGC
GTGGCCGAAG ACTTCAAGCT GGCCTCGGGT ACCTGGGTCG ATGTCGGCGG GCTGCGTACG
GCCTCGCTGT CCGCGGCCGG GGGCCTGCTC GCACAGGCCG TGGTCGGCGG CCACGACAGC
GACGCCGCGG TGCTCCTGGC CTGGCTCGAT CCCGGCCGTG CGAGCGAACT CGCCGGTCCC
GGAGAGCCTG CCGACTGGGT GCGTCACCCG GCGATCCACC AGGCCCTGCG CGAGCGCCTG
CGCGCGCCCC GGGGCACCGG CGCGTCGCAG CGCATCGCGC GCGTGCTGCT GCTGGTCGAG
CCGCCGCAGC TCGACGCCGG CGAGATCACG GACAAAGGCT ATGTCAACGC CGCCGCCGTG
CTCGCCCACC GCGCCGCCGA GGTCGCCCGC TGCGTCACCG TCCACGCGGA CGACGACACG
AGCGATATGG ACGACGTGGT CGAAATCCCG ATCTGA
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| Protein sequence | MSAPQPPPRR VPALAPPAVV AERRDDGAFV LRSPQPLRAH APTLGRWLER WARERPDAVF
LAERPSSRAP WRTLGYAEAL AGARAIAQAL LERGLSLERP VMILSGNSIA HALLTLGGYL
SGVPVVPVSE AYSLRSADHA QLRGVAELVT PGLVFAANGQ AFAPALRALD ARAGHDGIEI
VTADDTDAEG AENGAGGGTG ATPLSALLAT APGAALAAAS VGPDSVAKIL MTSGSTGRPK
GVLNSHRMLT SNQEALAQVW PFIDQQPPVI VDWLPWSHTF GGNHNLHLIL RSGGTMYIDG
GRPLPGRFDT TLENLADIAP TLQFNVPAGY ALLVQALERE RGLREHFFSR LQGIFYAAAA
LPQQTWDRLD RLAEETLGHR LWLTTAWGGT ETSPLVTSAH FPSEDAGNIG LPVPGCALKF
VPAGGKRELR VAGPNVTPGY HRQSELTAAA FDDEGFYRIG DAGELVDAEE PARGVRFAGR
VAEDFKLASG TWVDVGGLRT ASLSAAGGLL AQAVVGGHDS DAAVLLAWLD PGRASELAGP
GEPADWVRHP AIHQALRERL RAPRGTGASQ RIARVLLLVE PPQLDAGEIT DKGYVNAAAV
LAHRAAEVAR CVTVHADDDT SDMDDVVEIP I
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