| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2104 |
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| Symbol | |
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| ID | 8544490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2918776 |
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| End bp | 2920542 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646386811 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_003266542 |
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| Protein GI | 262195333 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.444225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGAG GCAGACGCAT CGCCGACGTC CTGGTCGCCC AGGGCGTGCG CCAACTCTTT
ACCCTGTGCG GTGGGCACAT CGCGCCCATC CTGGTCGAGA GCCAGCGCCG CGACATCCAG
GTGGTCGACG TCCGCCACGA GGCCAACGCG GTGTTCGCCG CCGACGCCGT GGCGCGACTC
ACCGGCATCC CGGGCGTGGC CGCGGTGACC GCGGGTCCCG GGGTCACCAA CGCGCTCACC
GCGATCAAGA ACGCCCAGCT CGCGCAGTCG CCGCTGGTGC TCCTGGGCGG CGCCACGGCC
ACGCTCTTGC GCGGCCGCGG CGCGCTCCAG GACATCGACC AGATGGCGCT GATCAAGCCG
CACGTGAAGT GGGCGGCGCG GCCGCGCAGC CTGCGCGAGA TCGTGCCGGC GCTCGAGCGC
GCCTTTGCCA TCGCCCGCCG CGGCGTGCCC GGACCGGTGT TCGTCGAGCT GGCCGTGGAC
CTGCTCTACG ACGAGCGCCT GGTGCGCGAG TGGTTCCTCA AGGACCGCAG CGGCGGCGAT
CCGACCCTGG GCCAGCGGGC CCAGGACCTG TACATCCGCG GCCACCTGGC CTACGTCTTC
GCCGAGGCCC GGGCCGTGCG CCTGCGCCCG CCCGCGCCGG CGCCGCTCGA GACCCCGTCG
ATGGAGGACG TGGCCGAGGC CGCGCGCGTC ATCGCCCAGT CCGAGCGGCC GCTGATGGTG
CTCGGCAGCC AGAGCATGCT GCACCCGACC CGGGCCCGCG AGCTGGTCGC CGCGGTCGAG
CGCATCGGCG TGCCCGTGTA CCTCTCGGGC ATGGCCCGCG GCCTGCTCGG TCGCAGCCAC
AACCTGCTCA TGCGCCACAA GCGCCGCGTG GCCCTGCGCG AGGCCGACAC CGTCATCCTG
TGCGGCGTGC CCTGCGACTT CCGCCTCGAC TACGGCGCCC ACGTGGCCCG TGCCCACGTC
ATCGGCGTCA ACCTCAGCCG CGAGGACCTG AGCCTCAACC GCAAGCCCGA CCTGGCCATC
AACGCCGATC CGCTGGCCTT TCTCAACCAC CTGTCCCGGG TCATGCCCGC GCAGCCGGCG
AGCTACGAGG CCTGGCGCGA TACCCTCATC GGCCGTGAGC GCGCCCGCGA GGACGAGATC
CGGGCCATGG CCGGACACGT GTCCGGCTCC GACTCGAGTG CGTCGGGCGA GGCAGACGGC
GGCGGCATCA ACCCGCTGGC GCTGTGCCAG GCCCTCGACA ACGTGCTCGC CGACGACAGC
GTGATCGTCG GCGACGGCGG CGACTTCGTG GCCACGGCCT CGTACACCGT GGCCCCGCGT
GGGCCCTACT CGTGGCTGGA TCCCGGCGTC TTCGGCACCC TGGGCGTGGG CGCGGGCTTT
GCGCTCGGCG CCAAGCTGGT GCGCCCCAGC GCCGACGTGT GGCTGCTCTA CGGCGACGGC
GCGGCCGGCT TCAGCATCAT GGAGTTCGAC ACCTTCGCGC GTCACGGCAT CCCGGTCATC
GCCGTGGTCG GCAACGACGC GGGCTGGACC CAGATCGCGC GCGACCAGGT CGACATCCTG
GGCACCGACA CCGCCTGTCG GCTCACCCAC ATGGACTACG ACCAGGTCGC CAGCGCGTGC
GGCGCCCACG GCATCCGCAT CAATGACCTC GCCCAGGTGC CCGGCGCCCT GCGCGAGGCC
GTCGAGGTGT CGCGCGAGGG TCGGCCGGTG CTGATCAACG CCATCCTCGC GGGTTCGGAT
TTCCGCAAGG GCTCGCTGTC GATGTGA
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| Protein sequence | MNGGRRIADV LVAQGVRQLF TLCGGHIAPI LVESQRRDIQ VVDVRHEANA VFAADAVARL
TGIPGVAAVT AGPGVTNALT AIKNAQLAQS PLVLLGGATA TLLRGRGALQ DIDQMALIKP
HVKWAARPRS LREIVPALER AFAIARRGVP GPVFVELAVD LLYDERLVRE WFLKDRSGGD
PTLGQRAQDL YIRGHLAYVF AEARAVRLRP PAPAPLETPS MEDVAEAARV IAQSERPLMV
LGSQSMLHPT RARELVAAVE RIGVPVYLSG MARGLLGRSH NLLMRHKRRV ALREADTVIL
CGVPCDFRLD YGAHVARAHV IGVNLSREDL SLNRKPDLAI NADPLAFLNH LSRVMPAQPA
SYEAWRDTLI GRERAREDEI RAMAGHVSGS DSSASGEADG GGINPLALCQ ALDNVLADDS
VIVGDGGDFV ATASYTVAPR GPYSWLDPGV FGTLGVGAGF ALGAKLVRPS ADVWLLYGDG
AAGFSIMEFD TFARHGIPVI AVVGNDAGWT QIARDQVDIL GTDTACRLTH MDYDQVASAC
GAHGIRINDL AQVPGALREA VEVSREGRPV LINAILAGSD FRKGSLSM
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