Gene Hoch_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2098 
Symbol 
ID8544484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2905076 
End bp2905813 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content65% 
IMG OID646386805 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003266536 
Protein GI262195327 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.211471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGT CAATTTGGGA ATGGCTCGTA CAGGCGACGC TCTGGTGCCT CTTCGGATTT 
TCCGTGGTGG TGTTCGCGGT CGCCATGGAG CGCGTGGTGG TGCTGTGGCG CTTTACCGAT
CGCGCGCGCA AACTCTCCGA TACCGTCAAC CGCTGCCTCA TGCGTGGCGC GCGCGGCGAG
GGACGCTCGG CGTGTGAGCG CTCGCGCTCG CCGCTGGCAG ACGTGTTCTT GGTCGGCTAC
GAGCGCTTTG GCCGCTCGAA ACCCGAGAAC GTCGACAGCG CCGTGCATCG CGAGCGCGCG
CGGGTGATGG TGAGCCTCAA GAATCGCCTG TGGATACCGG GCACCATCGG CGCCACCGCG
CCCTTCGTCG GTTTGTTCGG CACGGTGGTC GGTATCATGG AGGCCTTCCG CGACCTCGAA
CGCGCCGAGG GCAGCGGCCA GGAAGCCGGC ATCGGCGTGG TCTCGGGACA CATCTCCGAG
GCGCTCATCG CCACCGCGGT CGGCATCTTC GTGGCTGTCA TCGCCGTGAT CGTGTTCAAC
CTATTCAATC AGCGCATCGG CCGCATCGGT ATGGAAGCCA AGATGCTCAC CGACGAGTTC
CTCGAGCACC TGCACGAGAG CACGACGGAC GATCACGGCG GCGCGCCCAC GAGTGGCGAC
GACAAAGACA AGGACAAGGG CAAGGGCGGG ACGTCGGCCA AGGAGGAGGA CGCCGATGGC
GCTCGGAAAG CTGCCTGA
 
Protein sequence
MDQSIWEWLV QATLWCLFGF SVVVFAVAME RVVVLWRFTD RARKLSDTVN RCLMRGARGE 
GRSACERSRS PLADVFLVGY ERFGRSKPEN VDSAVHRERA RVMVSLKNRL WIPGTIGATA
PFVGLFGTVV GIMEAFRDLE RAEGSGQEAG IGVVSGHISE ALIATAVGIF VAVIAVIVFN
LFNQRIGRIG MEAKMLTDEF LEHLHESTTD DHGGAPTSGD DKDKDKGKGG TSAKEEDADG
ARKAA