| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2032 |
|---|
| Symbol | |
|---|
| ID | 8544414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2802521 |
|---|
| End bp | 2803357 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646386735 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003266470 |
|---|
| Protein GI | 262195261 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0545807 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.262342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGC AGATGGCCAA GCCGCAGACC CAGCGATCCG ACCCTTCGCC CGCGCAGGGC
GCCGAGGGCG CGGCGGTGTC GCTGCGCGGC GTCGCCCACG AGTTCGGCGA TGTGCGCGTG
TTCGAGGGCA TTGATCTCGA GGTCCCAGCC GGTCAGTTCG CGGCGCTGCT GGGGCCCTCG
GGCTGCGGCA AGAGCACGCT GCTGCGTCTG GTGGCCGCGC TTGAGCGGCC CAGCGCGGGG
GTGCTCGAGG TCGCCGGTCG TCGGCTCGAC GGGCGCCGGT CGCAGGCCGC GGACGCGGCG
ATCTCGTTCG TGTTCCAGGA CGCGCATCTG TTGCCGTGGC GCACCTTGGT GCGCAACGTC
GAGCTGCCGC TGGAGCTGGC CGGCGTGGAC GCGCGCGCGC GCCGCGAGCG CGCCATGGGC
ATGCTCGAGC AGGTCGGGCT GGCCGACGCG GCCACGCGCT ACCCGGCGCA GCTCTCGGGC
GGCATGCGCA TGCGCGGTTC GCTGGCGCGC GCTCTGGTCA CCGAGCCCGG CCTGCTGCTG
CTCGACGAGC CCTTTGCCGC GCTCGACGAG ATCACCCGGC AGCGCCTCGA TATCCAGCTC
TACGAGCTGT CGCGCGCGCG CAAGCTCACG GTGCTGCTGG TGACGCACTC GATCGCCGAG
GCGGTGTTTT TGGCCGAGCG TACGATCATG CTGTCGCGGC GGCCGGCGCG CATCGTGGCC
GACCGCGCGG TCGATATCCC GGGGGCGCGC GACGCGGGTC TGCGCAGCAG TCCGGCCTTT
GTCGAGGCGG TGCAGGCGCT GCACGGTGAT CTCGAGCGAG CGGAAGGCGG GCCGTGA
|
|---|
| Protein sequence | MMTQMAKPQT QRSDPSPAQG AEGAAVSLRG VAHEFGDVRV FEGIDLEVPA GQFAALLGPS
GCGKSTLLRL VAALERPSAG VLEVAGRRLD GRRSQAADAA ISFVFQDAHL LPWRTLVRNV
ELPLELAGVD ARARRERAMG MLEQVGLADA ATRYPAQLSG GMRMRGSLAR ALVTEPGLLL
LDEPFAALDE ITRQRLDIQL YELSRARKLT VLLVTHSIAE AVFLAERTIM LSRRPARIVA
DRAVDIPGAR DAGLRSSPAF VEAVQALHGD LERAEGGP
|
|---|
| |