Gene Hoch_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2025 
Symbol 
ID8544407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2793916 
End bp2794659 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content71% 
IMG OID646386728 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003266463 
Protein GI262195254 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.365478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG TTGAAACCAT CAAGAGCCTG TTCGTCCAGT CCGGCGCCGG TTGGGTGCTG 
TGGCTGCTGT TCGCGCTGTC TGCGGGCAGC GTCGCCGTGT TCATCGAACG CCTGGTCTAT
TTCCGCTCCA AGAGCGAAGA CGTGCGCGCG CTCGCGGCCG AACTCGACGC GCACCTGGCC
AGCGGCGCCT ACCAGGCCGC GCTCGACGCC CTGCGCCCGC TGCGCTCGGT GGGCGCGGCC
GTGGCCCGGG CCGGTTTGCG CCTGGCCCCG CGCGGCTCGG AAGCGGCCGA CAAAGGCATG
CAGAGCGCGA TCGCGGTCGA GCGCAAAGGA CTCGACGCGC GCCTCACCTA CCTCGGCACG
CTGGGCAATA ATGCGCCCTT CATCGGCCTC TTCGGCACCG TCATCGGCGT CATCCTGGCC
TTCGAGGAGC TGGGGCAGGT CACCGGCGCC ACCGGCGCGG CCGCCTCCCA GGTGGCCTCG
GCCGCGGTCA TGAGCGCCAT CGCCGAAGCC CTGGTGGCGA CCGCGGTCGG TATCGGCGTG
GCGCTGCCGG CGGTGGCCGC CTACAACTTC TTCCAGCGCC GCATCTCGGT GCTGCTCGAC
GACGCCGAGA CCCTGTCGAA TCTGGTCCTC GCCTACCTGG GCGCGCGATC CACCGCGGCC
CTGGCCGCTC CGTCCGAAAT CCCCGAGGAA GGCCGCGGCA AGGTCGACGG TGCGGGCGGC
GAGCTGCGCC CCGAGGTCGC ATAA
 
Protein sequence
MTTVETIKSL FVQSGAGWVL WLLFALSAGS VAVFIERLVY FRSKSEDVRA LAAELDAHLA 
SGAYQAALDA LRPLRSVGAA VARAGLRLAP RGSEAADKGM QSAIAVERKG LDARLTYLGT
LGNNAPFIGL FGTVIGVILA FEELGQVTGA TGAAASQVAS AAVMSAIAEA LVATAVGIGV
ALPAVAAYNF FQRRISVLLD DAETLSNLVL AYLGARSTAA LAAPSEIPEE GRGKVDGAGG
ELRPEVA