Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2020 |
Symbol | |
ID | 8544402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2789782 |
End bp | 2790765 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646386723 |
Product | Isochorismatase |
Protein accession | YP_003266458 |
Protein GI | 262195249 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1535] Isochorismate hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.745871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTATCC CCCGCATTAC GCCGTATCCG CTGCCCCAGC CGAGCGCGCT GCCCGAGAAC CGGGTGTCGT GGTCGCTCGC GCCGGCGCGC GCGGTCCTGC TCATCCACGA CATGCAGGAA TATTTCCTCG ACTACTACGA CGCCTCGGCT TCGCCCGCGC GCGAGATGGT CGCCCACATC GACCAGTTGC GCACGCGCTG CGCGGCGCTC GGCATCCCGG TCGTGTATTC AGTACAGCCG GCCGAGCAGA CGCCGGAAGA GCGCGGACTG CTCACGGACA TGTGGGGGCC GGGTCTGGTC GCGAAGCCGC ACAAGCAGGC GGTGGTGAGC GCGCTGGCCC CGCGCGCCGG TGACGTCACG CTGACCAAGT GGCGCTACAG CGCGTTTCAG CGCACCGATC TGCGCGAGCT GCTGCGCCGC TGGGGGCGCG ACCAGCTCAT CATCTGCGGC GTGTACGCGC ACATCGGCTG CCTGATGACC GCGGGCGAGG CGTTCATGAG CGACGTGCAG CCGTTCTTGG TCAGCGACGC CACGGCTGAT TTCGATCGCG AAAAACACCT CATGGCCATC GAGTGGGTGG CCCAGCGCTG CGGCGTGGCG CTGTCTACCG GCGATGCTCT GGCCGCGCTC GCCGAGCAAG CGCCGACGCA GACGGCTACG CCGGTGGAAA CCGGACAAGC GTCCGCTTCC GGGATCAGCC TCGAGCGCCT GCGCAGCGAC ATCGCCGAGA TTCTCGAAGA ACCGGCCGAG GACATCGCCG ATGACGACAA CCTGCTCGAT CTCGGCCTCG ACTCGATCCG GCTGATGTCG CTGGTCGAGC GCTGGCGCGC GCAGGGCGCC GAGCTGTCGT TTGTCGAGCT GGCCGAGCGG CCGTCGATTG CGGACTGGTG GACGATCCTC TCGGCGCCGA TGCCGCTGGC GGCCGACGCC GTGGCCAGCG CGCGCGCCGA GGCCGGCACG GCACCGCAGG CGGAGGAGCG TTGA
|
Protein sequence | MGIPRITPYP LPQPSALPEN RVSWSLAPAR AVLLIHDMQE YFLDYYDASA SPAREMVAHI DQLRTRCAAL GIPVVYSVQP AEQTPEERGL LTDMWGPGLV AKPHKQAVVS ALAPRAGDVT LTKWRYSAFQ RTDLRELLRR WGRDQLIICG VYAHIGCLMT AGEAFMSDVQ PFLVSDATAD FDREKHLMAI EWVAQRCGVA LSTGDALAAL AEQAPTQTAT PVETGQASAS GISLERLRSD IAEILEEPAE DIADDDNLLD LGLDSIRLMS LVERWRAQGA ELSFVELAER PSIADWWTIL SAPMPLAADA VASARAEAGT APQAEER
|
| |