Gene Hoch_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2014 
Symbol 
ID8544396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2778802 
End bp2779341 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content71% 
IMG OID646386717 
ProductDoxX family protein 
Protein accessionYP_003266452 
Protein GI262195243 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA TCCAACGAAT CGGCGTGGTG CTCATTCGCG TGGTCATCGC GCTGATGCTG 
GCCATCCACG GCATCGCGCG CATGCGCTTC GGCATGGTGG ACGAGCTCGG GAGCTTTCTC
GAGACCCAGG GCGTCCCGCT GGCCGGGGTG GCCGCGTACC TGATCACGGG CGTCGAGATC
CTCGGCGGCA CCAGCCTGGC GCTGGGCTTC TTCGTCACCC CGCTGTGCGC CTGGTTCGCG
CTGCAGCTCG TCCTCGGCAT CGTCTACGTG CACGCCAGCG CCGGCTGGTT CGTGGTCGGC
TTTGGCCACG ACGGCATGGA GTACAGCGTG GTGCTGATCG CCGCGCTGCT GGCCGTCGCG
CTGCTCGACC GCGGGGTGGA CCCCTTCGCC CCGGTGGCCG AGCTGCCGCC CGCGGCCGAT
GGCGTCGTCG ATGGCGGCGA TGGCGGCGTC GATGGCGGCG CCGATGCCGC GACCGAGGCC
GACGACTCCC AGGCCGAGGC CAGCGCCGAC GGGCGCGTTT ATCGTCCGGC CGTCCAGTAA
 
Protein sequence
MSKIQRIGVV LIRVVIALML AIHGIARMRF GMVDELGSFL ETQGVPLAGV AAYLITGVEI 
LGGTSLALGF FVTPLCAWFA LQLVLGIVYV HASAGWFVVG FGHDGMEYSV VLIAALLAVA
LLDRGVDPFA PVAELPPAAD GVVDGGDGGV DGGADAATEA DDSQAEASAD GRVYRPAVQ