Gene Hoch_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2013 
Symbol 
ID8544395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2777754 
End bp2778749 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content74% 
IMG OID646386716 
Productmethyltransferase small 
Protein accessionYP_003266451 
Protein GI262195242 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATC TGGGTGACGA GGTGTGGGCG GCGCTGGGCG CGCGGCTGCG GGCTTGTGGC 
CTGGGTGAGC GCGCGTTGCG CCACCGCTTT GCCGTGCGCC ATCTCGGCCA CGCGCCGCTC
GGCAGCGGTC AGGCGCCGGT GCGGGTGGCG CCCGCGGCCC TGCTCGTGCA CCTGTTCGCG
GCCGGCGATA CCGTTTCCCT GCGGCCGCTG CGGCGCCTGC TCGGCGACGC CGTGGACCTG
CTCGACGAGG CCGGCCTGAT CGCCATCGAC GGCGATCTGG TGCGCGCGCG CGTGGCCATC
CTGCCGCTCG GCGACGCCCT GGTGGTGAGC GATCGCGCCG ACTGTCTGCG CGGCCACGAC
GTGGTCGCCT GCGCCGACGA CAGCGCCTTT CACCTGCTGT CGATGGTGCC CACGCGTCCG
GCGCGCCCGG GCATGCGCTG GCTCGATGTC GGCACCGGCA GCGCGATCGT TCCGCTGGCC
CGACCCGGCT CCGCCGCCCA CATCGCGGCC ACCGATATCC ACGTCCGCGC CCTGGAGATG
GCGCGCATCG GCGCAGCGCT CAGCGGCCGT CCCGACATCG AGCTGCGCGA GGCCGACCTG
CTCGCCGACG CCGCCTGCGA GGGCCCCTGG GATCGCATCA CCTTCAACGC GCCCATTCCC
AACGCGGCGC TGCCCTGTCC CGCGGACACG CCGCTGTATC GACGCGGCGC CGACGACGTG
CTTGAGCGCT TCTGGGAGCA GGTCGGCGAT CTGGTCGCGC CCGCCGGTGA AGTCATCGTG
CACTCGTGGC AGCCGCTCGA CGACAGCGTG CTCGAGCGCG CGCTGCCCGG GCGTCTGCTG
GTTCTGCGCT ACACGCCGCC GGGCGCGGCG CCCGCTTTCG GCGTGAGCCT GTGGCAGCCG
GACGCGCCGC GCGAGCGCCG CCTCATCCAT CAGGAGCTGA GCGCGAGTAC GCCCTACCTG
GTGCGCGGCG GGTTCGAGCG GCTGCTCGCA GGTTAG
 
Protein sequence
MADLGDEVWA ALGARLRACG LGERALRHRF AVRHLGHAPL GSGQAPVRVA PAALLVHLFA 
AGDTVSLRPL RRLLGDAVDL LDEAGLIAID GDLVRARVAI LPLGDALVVS DRADCLRGHD
VVACADDSAF HLLSMVPTRP ARPGMRWLDV GTGSAIVPLA RPGSAAHIAA TDIHVRALEM
ARIGAALSGR PDIELREADL LADAACEGPW DRITFNAPIP NAALPCPADT PLYRRGADDV
LERFWEQVGD LVAPAGEVIV HSWQPLDDSV LERALPGRLL VLRYTPPGAA PAFGVSLWQP
DAPRERRLIH QELSASTPYL VRGGFERLLA G