Gene Hoch_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1916 
Symbol 
ID8544298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2634389 
End bp2634775 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content61% 
IMG OID646386621 
Productresponse regulator receiver protein 
Protein accessionYP_003266356 
Protein GI262195147 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.639162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAA TTCTCATCGT CGACGACGAG CCCTTTGTAC GCAACGCCCT GTGCCGAGTC 
CTCAATGGCT ACGAGCTGTC CACCGCCGCC AATGGCGAGG AGGCGCTGAG CCAGCTAAGC
GCCGACGAGC TCAGCTTCGA TCTCATCCTG TGCGATCTGA TGATGCCGGG CGTCTCGGGT
ATGGATATCT ACGAGTTCCT CAAGCGGCGG CAGCCCGGCC GCGAGATGCA GCTCATGTTC
CTCACCGGCG GCGTCTTTAC CGAAGAGGCG CAGGCCTTCG TGGCCAACAT TCCCAATCCG
GTCATTCAGA AGCCCTTCAA GTTCGACCAG CTTCGCAATC TCATCAAAGC CAAGCTCGCG
GCGGCCAGCC CCTCGGACGC GCTGTAG
 
Protein sequence
MARILIVDDE PFVRNALCRV LNGYELSTAA NGEEALSQLS ADELSFDLIL CDLMMPGVSG 
MDIYEFLKRR QPGREMQLMF LTGGVFTEEA QAFVANIPNP VIQKPFKFDQ LRNLIKAKLA
AASPSDAL