Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1893 |
Symbol | |
ID | 8544275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 2602130 |
End bp | 2603167 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 646386598 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_003266333 |
Protein GI | 262195124 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACACCA CGCCCTCAGC CGCGCGCGCC GGCGCCCCCG AGCCGGCCGC CCGCTTCGCC GCCCCGCGCG CCGACCGCGC CGACAAGCTG GTCGGCGAGC ACTTCCCGGC CGCCAGCCGC CGCCGCGTCA CCGCCCTGTT CGCCGACGGC CGCGTGCGGG TAAACGGACG CAAGGTCAAA AAAGGCGCCA TCGTCCCGGC CGGCGCCGAG ATCGCGCTGA CCCGGCTGCC GGTCGCCGAC GAGGAGCTGG TGCCCCAGGC CAACCACGAG CTGGTTCTCG ACCTGCTGTA CGAAGACGAC GCGATCGCGG TGGTGAGCAA ACCGGCCGGG CTGCCCAGCC ATCCGCTGCG CGCGGGCGAG CGCGACACCC TGGCCAACGC CCTGGTCGCC CACTACCCGG AGTGCGCCGC GATCGGCGCC GACCCGCGCG AGGCCGGGCT GGCGCACAGG CTCGACATCG ACACCTCCGG CGTGCTCGTG GCCGCGCGCA CGCAGAAGGC CTGGCACGCG CTGCGCGCCG CCTTTGGCAG CGGCGCGGTG GAGAAGCACT ACCTGGCGCT CACCTTCGGC GCGCCCAGCA GCGGCGAGAT GGATGTCGCC CTGGTCCAGC GCGGACGCCG GGCGCACCCG GTGTTTCGCG ATGACGCAGG CTTCGGCGGA TTCGGCGGCC GCGGAGAGCG CGGCGATGCG CTGCCCGCGC GCACCACCTG GCGCATCGAG CGCCGCTTCG GCCCCGCGTG TCTGCTCCTG TGCCGCGCGC ACACCGGGCG CATGCATCAG ATCCGCGTGC ACCTGGCCCT GGCCGGCGCC CCCATCATCG GCGACTCGCT GTACGCGCCC GCGCCCGAGA CCCTGTCGGC GGCCGAGCGC GAGGACCTCG CCGCGCTCAG CGAGCACCCC GAGGCGACGC GCCACTTCCT GCACGCCAGC GCCGTCACCA TCCCCCACCC CGAGACCGGT CGCGCGCTGC GCATCGAGGC GCCGCTGCCC GAAGGCCGCG CGCAGTTTCT CGCCGAGCTG TCCCGGCGCT GGCCCTGA
|
Protein sequence | MDTTPSAARA GAPEPAARFA APRADRADKL VGEHFPAASR RRVTALFADG RVRVNGRKVK KGAIVPAGAE IALTRLPVAD EELVPQANHE LVLDLLYEDD AIAVVSKPAG LPSHPLRAGE RDTLANALVA HYPECAAIGA DPREAGLAHR LDIDTSGVLV AARTQKAWHA LRAAFGSGAV EKHYLALTFG APSSGEMDVA LVQRGRRAHP VFRDDAGFGG FGGRGERGDA LPARTTWRIE RRFGPACLLL CRAHTGRMHQ IRVHLALAGA PIIGDSLYAP APETLSAAER EDLAALSEHP EATRHFLHAS AVTIPHPETG RALRIEAPLP EGRAQFLAEL SRRWP
|
| |