| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1858 |
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| Symbol | |
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| ID | 8544240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2557545 |
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| End bp | 2560220 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 646386564 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_003266299 |
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| Protein GI | 262195090 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCCC GCCTGCCCAT CGACGAGGTC CTGCCCGCGC TCATCGACGC CCTGCGCGAG
CGCTCCAGCG CCGTGCTGCT GGCCCCGCCC GGCGCCGGCA AGACCACGCG GGTGCCGCCG
GCGCTGCTCG ACGCCGGTCT GGCCGGGGAT GGCGAGATCG CGGTGCTCGA GCCGCGCCGC
CTGGCCGCGC GCATGGCCGC GCAGCGCGTC GCCGAGGAGC TGGGCGAGCG GGTCGGCGGC
CGGGTCGGCT ACGAGGTCCG CTTCGACCGC GCGGTCAGCG CCGAGACCCG CATCCGCTTC
GTCACCGAGG GCGTGCTCAC GCGCAAGCTG CTCGGCGATC CCGGGCTCAG CGGGGTCGGC
GCCGTGGTCA TCGACGAGTT CCACGAGCGC CACCTGCAAG GCGACCTCGC CCTGGCCCTG
CTGCGCCGCC TGCAGCAGCG CGATCGCCCG GGGCTGCGTC TGGTGGTGAT GTCGGCGACG
CTCGATCCCG GACCGGTGTC CGCCTTCCTC GGCGAATGCC CGGTGGTCCG CTCGGAGGGC
CGCCAGTATC CGGTCGAGCT CGACTACGCC GCGCCCGGCG ACGATCGCCC GCTGGCCAAG
CGCGTGGCCG GGGCCGTGCG CGTGGCCCTG CGCCACCGCC CGGAGCAAGC GCCGGAGCAA
GCGCAGGCGC AGGACCCGGC CGGCGGCGAT GTGCTGGTGT TTCTGCCCGG CGCCGGCGAG
ATCCGGGCCG CGATGGACGC CTGCCGGGGC GAGCGCGGCC AGCCCGCGGG TCTGGATCTC
GGACAGCGGG CCGATCTCGT GGCCCTGCAC GGCGACCTGC CCGCGGCCGA GCAGGACCGC
GCCGTGCGCC CGAGCGCGCG CCGCAAGGTC ATCTTCGCCA CCAATGTGGC CGAGAGCTCG
ATCACCATCG ACGGCGTCAC CACCGTGATC GACAGCGGGC TGGCGCGCGT GGCCCGGCAC
GCGCCCTGGT CGGGCATCCC CACGCTGCGC GTCGAGCCCA TCAGCCAGGC CAGCGCCGCC
CAGCGCGCGG GCCGCGCCGG CCGCACCGCG CCCGGGCGCT GCGTGCGCCT GTACACGCGC
CACGAACACG ACAGCCGCCC GGCCTTCGAC CCGCCCGAGA TCGCGCGCGC CGACCTGGCC
GAGGCCGCGC TGTGGCTGCG CGCGCTCGAT ATCGACCCGC TGGACGGTTT CGGCTGGTAC
GAGGCCCCGC CCGAGGCTGC GCTACGCGCG GCGGACGAGC TGCTCGAGCG CCTGGGCGCG
GTCGCCGGCG GCCGCCTGAG CAAGCTCGGT CGCGCCATGC TGCGCCTGCC CGTGCACCCG
CGCCAGGCTC GGCTGCTGCT CGAGGCCCAG GCCCGCGGGG TCGGCGCCGA GGGCTGTGTG
CTGGCGGCCC TGCTCGGCGA GCGCGAGCTG CGCTTGTCGC GGCGCAGCTC GCTGGGCGGA
CGCGGCCCGG CGCCGGCCGC GCTCAGCAGC GGGCCCTCGG ATCTGCTCGA AGATCTCGAC
GCGTTCGCGG CCGCGAGCGA ACGCGGCGCA GGCGGCGCCC GCGCCCACGG TCTGGATCCG
GGCGGGCTGC GCGCGGTCGA TCGCGTGCAG CGCCAGCTCG CCAGCGCGCT CAAGCGCACG
CGCTCGCGCG AGCTGCCGAC GGCGCCGCGA CCGCGCACGC CCGAGGCCGT GGATGAGGCG
CTACAGATCG CCACCCTGGC CGGCTATCCC GACCGCGTCG GCCGCCGGCG CCGGCCGCGC
GAGCCCGAGA TCGTGTTCGT GGGCGGCGGC AGCGCGACGC TTTCGCCGAC CAGCGTGGTC
CTGGGCGCCG AGTTCGTGGT CGCCGTGGAC GCGCGCGAGC GCGAGCGCGG CCGCGGCGCC
GTGATCCACC GCGCCAGCGC CGTGGACCCG GCGTGGCTGC TGGACCTCTT CCTCGAGCAC
ATCGACGAGC GCGACGAGCT TTTGTGGAAC GCCGAGCGCC AGCGGGTCGA GCGGGTCGCG
CGCATGGTCT ATGGCGACCT GGTGATCGAC GAGCAGCGCG ATCCCGGCGG CGCCCGCCGC
GACCCGGCGA CGGCCGAACG CGCGGCCGAG ATCCTGGCCG AGGCCGCGCT CCAGGCCGGG
GTCGAGCGTT TTTGCGATCG CGACGCGGTC GCCGCGTGGC GCTGCCGCGT GGCCTTTGCC
GCCGGCATCG CGGGCCCCGA ACGCATCCCG GCGCTGGGCG AGGACGCCGA GCGCGAGGCC
CTGCGGCAGA TGTGCCGCGG CTGCATCGGC TTCGACGAGC TGGCCCAGCG CTCGCTGCTC
GACGGCCTGC GCGCCCAGCT CGCGGCCGCG GCGCCCGAGG CCCCGGCCCT GGTCGAGCGC
CTGGCGCCGC GCCACGTGGA CATCGCCGGG CGCCGGCGCG TGCCCGTGCA CTACGAGAGC
GATCGCCCGC CGTGGATCGA GTCGCGGCTG CAGGACTTCT TCAGTATGAG CGCGGGCCCG
AGCGTGGGCG GGGTGCCGCT GACCCTGCAC CTGCTGGCGC CCAATCAGCG CGCGGTGCAG
GTGAGCGCCG ACCTGGCCGG GTTCTGGGAG CGTCACTACC CGGCGCTGCG CAAGCAGCTC
ATGCGCCGCT ACCCCAAGCA CGCCTGGCCC GACGACCCGG CGCACGCGCC GCCGCCGCCG
CCGCGGGGTT CGGGGCGGGG ACGCAAACGC CGCTGA
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| Protein sequence | MSARLPIDEV LPALIDALRE RSSAVLLAPP GAGKTTRVPP ALLDAGLAGD GEIAVLEPRR
LAARMAAQRV AEELGERVGG RVGYEVRFDR AVSAETRIRF VTEGVLTRKL LGDPGLSGVG
AVVIDEFHER HLQGDLALAL LRRLQQRDRP GLRLVVMSAT LDPGPVSAFL GECPVVRSEG
RQYPVELDYA APGDDRPLAK RVAGAVRVAL RHRPEQAPEQ AQAQDPAGGD VLVFLPGAGE
IRAAMDACRG ERGQPAGLDL GQRADLVALH GDLPAAEQDR AVRPSARRKV IFATNVAESS
ITIDGVTTVI DSGLARVARH APWSGIPTLR VEPISQASAA QRAGRAGRTA PGRCVRLYTR
HEHDSRPAFD PPEIARADLA EAALWLRALD IDPLDGFGWY EAPPEAALRA ADELLERLGA
VAGGRLSKLG RAMLRLPVHP RQARLLLEAQ ARGVGAEGCV LAALLGEREL RLSRRSSLGG
RGPAPAALSS GPSDLLEDLD AFAAASERGA GGARAHGLDP GGLRAVDRVQ RQLASALKRT
RSRELPTAPR PRTPEAVDEA LQIATLAGYP DRVGRRRRPR EPEIVFVGGG SATLSPTSVV
LGAEFVVAVD ARERERGRGA VIHRASAVDP AWLLDLFLEH IDERDELLWN AERQRVERVA
RMVYGDLVID EQRDPGGARR DPATAERAAE ILAEAALQAG VERFCDRDAV AAWRCRVAFA
AGIAGPERIP ALGEDAEREA LRQMCRGCIG FDELAQRSLL DGLRAQLAAA APEAPALVER
LAPRHVDIAG RRRVPVHYES DRPPWIESRL QDFFSMSAGP SVGGVPLTLH LLAPNQRAVQ
VSADLAGFWE RHYPALRKQL MRRYPKHAWP DDPAHAPPPP PRGSGRGRKR R
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