| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1603 |
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| Symbol | |
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| ID | 8543985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2192391 |
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| End bp | 2194163 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646386311 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_003266046 |
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| Protein GI | 262194837 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.150565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTGC TCGCCCGCGT ATCCATCGCG CTCATCGTCA GCTCGGGTTT CGCCCTGGTC
GCCCTGGCCG CGTCCGGCTG CAACAAAAAC GAGCGCACCG CGGCGCTAGC CGCGCCCGCG
CCAGCCGCGC CCGCGCCCGC CCCCGCCGCG TCTGACCACG ACGCGCCCGC GCCCGCGAGT
CCCGCGCCCG CGCAGCCGGC CGCCGCGGGG GCCGGCGATG CGCTGCCGCC GACGCAGCTC
GAGTTGCTCG AGCCCGGCGC CGAGCCGCGC GCCCGGCTGC GATTCACGGC AGCACAGGGC
GAGGTCGGCG AATGGCTGCT CACCAACCAC GTCAGCTTCC GTTCCACGGC CCCGGCGGGG
ATCCTCGACG ACGCCAAGCA GTCGCCGCTC TCGGTCCTCG TCGAGCTGCG TATCGACCGC
GTCACCGAGA GCGGCGACCG CCATGGCGCG TTTCGCATCG GCGGCGTGCC ACCACTCGCC
GGCACCGCGC CCCTCGAAGG CACCTTGGTG GTCTCGGAGC GCGGCATCGT CACCGCCTTC
CACCTCGACC TCGTGGCCGA GACCGGCGCC GTGCTGTCCG ACGAGGCCCG CGTGCTCAGC
GAACTCCACG CGCACATCGT CCCGCTGCCC GACGAAGCGA TCGGCGTCGG TGCCAGGTGG
CGGGCGACGC GCCCCGGGGT GCTGCCCCCG TGGCACACCA CCGAAGTCGC GGAGTACGAA
TTGCTCGCGC GCGCGGGCGA CCATCTGCGG ATCGCGGCGA CCAGCGAGTA TCGATTGGAC
AGTCAGCAGC CTGGCGAGTG GCGCATCAGC TCGCTACAGG GCGGCGCCCG TGGCGCGTTC
GACGTCGAGC TCGGGCATCT GCTGCCGCGC TCGCGTCGGC AGGTCGAGGT CGCCGTCACG
CTGCAGCCAT GGGGCGATAC GATAACGCTC GAGCACACGC GCGAGCTGGC GGTGCGTTCG
CCGGGCGCGT GGCCGCCCCT GCCCATCCCG GTGGCGTTCC TCGATACCGC CGAGCAGGGC
GATCCACTGC TACAGCGATC GCAGCCGTAC AATCCCTGCG TCGGCCTCGA CGGCGCGCGT
ACAGGCGCCG TGTCGTGGGA CTACCCGGGC GGGGACCAGC GCCAACTGAC CGGGACCTGC
GCCCAGGGCC GCACATCGGA CACCTGGACG GCGTGGCACC CAGACGGCGC CAAAATGCTC
GAGGCCAGCT TTGCCGACGG CGTCCCCAGC GGCCAGTGGC GCCAGTGGGA TGAGCGCGGC
GCCCTGCTCG GCCGCTCGCG GTTTCGCGCC GGCCGTGGGC GCCTGGGCTA TTGGTGGGGC
AACGGACGCA AACGCGTGCA GGCGCAGCTC GAGGGCGGCG TTCTGCACGG CGCCTTCGCC
TCGTGGTTCG AGACCGGCGC GCCGCAGGCG CGAGGACGCT TCCGCGACGG CGAGCGCACC
GGCGCGTGGC AGGTCTGGGA CGCGCAGGGA CAGCTCGTGC GCGATATCCT GCTCGATCCC
GCCTGCGGTA TCGTCCATTC GGTGGTGGAA GGCGGCCCCG CGGCCATCGG CGGCCTGCAG
GCGGGCGATC ATATAGTCGC CGTCGACGGC GTCGCGCTGC GCGATCGCAA CAGCCTGAGC
GCGGCGCTGC AGGCGGCCGG CGAAGGCCCG ATCGCGCTGC GCATCGTGCG CGGCGGCCGC
GAGCGCAGCG TGCGCGTGCG ACCCCGGGTT CAGGGCGACG AGCCGCCCCG CATCGGCATT
CAGCGCGCCT GCGAGCGCGA CGCCGGCGAG TGA
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| Protein sequence | MHVLARVSIA LIVSSGFALV ALAASGCNKN ERTAALAAPA PAAPAPAPAA SDHDAPAPAS
PAPAQPAAAG AGDALPPTQL ELLEPGAEPR ARLRFTAAQG EVGEWLLTNH VSFRSTAPAG
ILDDAKQSPL SVLVELRIDR VTESGDRHGA FRIGGVPPLA GTAPLEGTLV VSERGIVTAF
HLDLVAETGA VLSDEARVLS ELHAHIVPLP DEAIGVGARW RATRPGVLPP WHTTEVAEYE
LLARAGDHLR IAATSEYRLD SQQPGEWRIS SLQGGARGAF DVELGHLLPR SRRQVEVAVT
LQPWGDTITL EHTRELAVRS PGAWPPLPIP VAFLDTAEQG DPLLQRSQPY NPCVGLDGAR
TGAVSWDYPG GDQRQLTGTC AQGRTSDTWT AWHPDGAKML EASFADGVPS GQWRQWDERG
ALLGRSRFRA GRGRLGYWWG NGRKRVQAQL EGGVLHGAFA SWFETGAPQA RGRFRDGERT
GAWQVWDAQG QLVRDILLDP ACGIVHSVVE GGPAAIGGLQ AGDHIVAVDG VALRDRNSLS
AALQAAGEGP IALRIVRGGR ERSVRVRPRV QGDEPPRIGI QRACERDAGE
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