| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1593 |
|---|
| Symbol | |
|---|
| ID | 8543975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2180264 |
|---|
| End bp | 2184397 |
|---|
| Gene Length | 4134 bp |
|---|
| Protein Length | 1377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646386301 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003266036 |
|---|
| Protein GI | 262194827 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3899] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGAG CGCTGGCAGA CGAGTTCCGA GGCACCGAGC GCTTTTCGAT CGTGCGGCGC
CTGGGCGCCG GCGGCATGGG CGTGGTCTAC GAGGCCTTTG ATCACGAGCG CCAGGCCCGG
GTTGCGCTCA AGACCCTGAG CCGCTTCGAC GCCACCGCCC TGTACCTGTT CAAACGCGAG
TTTCGCGCCC TCACCGAGCT CGTCCACGAA AACATCATCT CGCTCTACGA GCTGATTTCC
GATGGTGATC TGTGGTTTTT CACCATGGAG CTCATCGACG ATGGCGCCGA GCTCATCGCC
TATCTCGAAG AGCAGATCGG CGCGCCCGGA CCGCGCCAGA CGCCCGCGGG CCCGGAGCTG
TCGTCCGCGC CCATCGCCAT CCACAGCTCG TGGCTGATGG ACAGCCTCAG CGGCGAGACC
ATCGCCGACA CCGACGCGAC GCTCGACCTG GACCGCAGCG CAGTGGGGCA CGCGACAGGT
GCCGCGGCAG CGCACGCGAG CGCGCCGAGC GGCCGCGCCC AGGCCACCGT GCTCGGCGTC
GGCTCCGTCG GCTCCGGGCG CATCGACGCG CCGCTCAGCG CCCGGGCGGG CGAGGCCGCC
GATGTCGATG CCCATGCCGC TGACGCTGCG CGCCCCGGCG CCGGCGAGGT CGAAGCCGAG
GAGCCGCCGC GCCGCGACTA CGCGCGCCTG CGCGAGATAT TCGGACAGCT CGGCGAAGGC
GTACAGGCGC TGCACGCCGC CGGCAAGCTG CATCGCGACC TCAAGCCGAC CAACGTGCTC
GTGCGCCGCG ACACCGGCCG CGTGCTGCTG CTGGATTTCG GACTTGTGGC CGATCTCGAG
CGCGAGGCCG GCGCGCCCTC AGCGCCCGGC GAGGCTGGTG AGGCAGGCGG CGCGGGCGAC
GACAGCGGCG AGATCTCGAG CCGGCGCGTG TACAAGACCC AGCAGGGCCA GGTGGCCGGG
ACCATCGCGT ACATGGCGCC CGAGCAGGCC TGCGGCGTGG CCCTCGACGA GGCCAGCGAC
TGGTACGCGG TCGGCGTGAT GCTGTATCAG GCGCTCACCG GCGTCTTGCC CATCAGCGGC
ACCGCGGCGC AGATGCTGTA CCAGAAGCAG ATCTTCGATC CGCGGCCGCC GCGCGCCCTG
ATCCCGTCGG TGCCCGCCGA CCTCGACGCG CTGTGCATGG AGCTGCTCGC GCGCGATCCC
GCGCAGCGGC CCAGCGGCGC CGAGCTCATG CACCGGCTGA CCGGCCGCGC CCAGCCGTCG
CGCGCGCACA CGGCGACCGT CGATCTCGCC GAGGCCACGC CCTTCGTCGG CCGCGGCGCC
CACCTGAGCG CGCTGCGCCA GGCCCTGGCG CTCATGCTCG GCGGACACGG CGTGGTCTTC
CGGGTGCACG GCTCCTCGGG GGCGGGCAAG AGCACGCTGG TGCAGCACTT CCTCGACGAG
GCCGGACGCG CGGCGGGCGC GCTGGTGCTC ACCGGCCGCT GCTACGAGCA GGAGTCGGTG
CCGTACAAGG CCGTGGACAG CCTGATCGAC GCGCTCACCC GCTATCTGCT CGGCGACGAG
GAGGCGTGTG CGGCCGTACT CGGCGAGGGC GCCGTGCACG GCGTGGGCGC CGAGCTCGAC
GCGCTGGCCG TGCTGTCGCG CCTGTTCCCG GTGTTGCGGC GGCTGCCGGC CGTGGACGCA
GCCGCCGACT CACTGGCACA CACCTCCGAG CTGCGCGTGA TGCGACAGCA GGCCTTTGCC
GCCCTGCGCC GCCTCCTCGG ACGACTGGCC GAATACCGAC CGCTGATCGT GTACATCGAC
GACCTGCACT GGGGCGATGG CGACAGCGCG GCGCTGTTGG CCGAGCTGCT GGCGCCGCCC
GATCCGCCGC CGCTGCTGCT CCTGGCCGCG TATCGCAGCG AGTACGCCGA GACCAGCGAG
TGCCTGCGCG CGCTCGGCGC CTCGGCCCTG GCCCGCGGTT CGGCGATGAC GCCCGGTGCG
AGCGGCGTGG CGGCCGGTGA CCTGCACCGC GGCGAGCTGG TTGTCGAGCC GCTCGGGGCC
GAGCACGCGC GCGAGCTGGC CGCCCAGCTC CTCGCCATCC ACGGCCTGCG CGCCAGCGAG
AGCGACCTCG ACGAGCAGGG CGGCGACCTG CGCGTCGAAT GGATCGCGCG CGCCTCGCGC
GGCAGCGCCC TGTACGTGCA CGAGCTGGTG CGCCACCTGG CCGGCGGCCG CGACCTGAGC
ACGCTGAGCG AGCAGGGGCT CGACCACGTG CTGTGGCTGC GGATCTCGGA GCTGGCCGCG
CCCGTGCGCC GGCTCATCGA GATTCTGGCG GTTGCCGGAC AGCCGGTCAA ATTACGGCAG
GCGCAGCAGG TGGCCGAGCT GGGCGCGGTG CCCCAGCGCG TGCTGCGCGA TCTGCGCCTG
GGCAACCTGG TGCGCTCGAG CGGTCCGGGA CTGGACGACG ATATCGAGTG CTTTCACGAC
CGCGTGCGCG AGAGCGTCCT GGCGCATCTG CAACCGGAGC AGCTCAGCGG CTATCATCTG
GCGCTGGCGC AGATGTTCGA GAGCGGCGGC GAGGCCGACC CAGAGACCAT CGCCGCGCAC
TACCTGGCCG CCGGCGACGC GCCGCGCGCC TGTCGCTACT ACGAGGACGC CGCGGCCAGC
GCGCTGGATA GCCTGGCCTT CGACCGCGCC GAGGCCTTTT ATTCGCTGGC CGTGGAGCTG
GCGGCCGACG ACGACACCCG CGTGCGCCTG TGCGAGCAGC GCATCCACTT CTACACCGAC
ATGGCCCGCT TCGACGACGC CTACGCGTGC GCGCGCGAGG GCCTCAAGCT GCTCGGCGTC
AAGCTGCCCA AGGGCTTCGT GCCGCCGCTG TTCGCGGCCG ACTTCGCCAA GGCCAGCCTG
CGCCTGCGCG GCCGCGACAT CGCCGGCCTG GTCGAGCTGC CGACCATGCG CGATGCGCGG
CGCGAGGCGG CGGTGCGGCT GATGAGCGCG GTGGCCAAGG CCGCGTATCA GATCCGGCCC
GAGCTGTGCG TGGCCGTGGC CACCAAGATC GTCAACCTGT GCCTGGCCCA CGGCAACACC
GCCGAGTGCG CCATCGGCTA CATGGTCTTT GGCGCCATCT TCCAGGGCGG CGTGCTCGGC
CGCCACCGCG TGGGCTACGA TTTCGGACAG TTGGCCCTGG CTCTGATCGA ACGCTTCGGC
AACCATCGCC TGCGCGCCGA GGTGAGCTTC GTGGTCGGCT ACTTCGGCAC CTCGTGGCTG
CGGCCGGCGA GCGAGGCCGA GGCGCTGTGG CGCGTGGCCT ACGACAGCGG CGTGGCCACC
GGCGACCTGT TCCACACCGG CTGCGCGGCC TGCTGCCTGG TTCTCGGACA GCTCATGCGC
GGCGCGCCGA TCGACGAGAT CCTGGCCAGC GCCGAGGCGG TGCAGCCCGA TCTCAGCCGC
GCCGGCCTGC GCATTCCCCT GGGCGCGATC GCGGCCGTGC GCCAGACCGT GCGCAACCTG
CGCGACCAGA CCGCGGGCCC GGTGTCGCTG AGCGACGAGG GCTTCGACGA GGCCGCGCTG
GTCGCCGAGC TGCCATCCTG GGGCATCCGC CACTTCGAGC ACTTCTACTA CCTGTGCAAG
ATGGCGCTGA CGTATCTGCG CGGCACGCCC GCGCAGGCGC TGGTTGCGGC CGAGCGCGCG
GCGCCGTTTC GCAAAGAGTC GCGCGGCATG CTGCACGGCG CCGAGCACGG CTTCTGGCTG
GGCCTGATCG CGGCCGCCGG CTACCAGCAC GCGCCGGCGC GCAAGCTCTT GCGCACGGTG
CGCGACGAAC ACGCCGCCCT GAGTAAACTC GCCGAGCAGT GTCCGGAAAA CTTTGCGGCC
AAAGCGCAGC TCGTCGCCGC CGAGCTGTCG CGTTGCCGCG GCCGCGCGCT CGAGGCCCTG
GCCGGCTACG CGCAGTGCGC GCGCCTGGCC GGCGACAGCC AGCAGCTACA GGTCGAGGCC
CTGGCGTGTG CGCGCGCGGC TTCGCTGCTG GCCGCCGACG CCAGCGCGGC CCAGGCCGCC
GGCGAGAGCG CGGCCACCTG GCGCGAGCGG GCGCGCGTGG CCTGGCGCCG CTGGGGCGCT
GATCCCGATG TTCTGGCTCG CCCCGGAGGC GCGCCGTCCG AGTCCGACGC CTGA
|
|---|
| Protein sequence | MGRALADEFR GTERFSIVRR LGAGGMGVVY EAFDHERQAR VALKTLSRFD ATALYLFKRE
FRALTELVHE NIISLYELIS DGDLWFFTME LIDDGAELIA YLEEQIGAPG PRQTPAGPEL
SSAPIAIHSS WLMDSLSGET IADTDATLDL DRSAVGHATG AAAAHASAPS GRAQATVLGV
GSVGSGRIDA PLSARAGEAA DVDAHAADAA RPGAGEVEAE EPPRRDYARL REIFGQLGEG
VQALHAAGKL HRDLKPTNVL VRRDTGRVLL LDFGLVADLE REAGAPSAPG EAGEAGGAGD
DSGEISSRRV YKTQQGQVAG TIAYMAPEQA CGVALDEASD WYAVGVMLYQ ALTGVLPISG
TAAQMLYQKQ IFDPRPPRAL IPSVPADLDA LCMELLARDP AQRPSGAELM HRLTGRAQPS
RAHTATVDLA EATPFVGRGA HLSALRQALA LMLGGHGVVF RVHGSSGAGK STLVQHFLDE
AGRAAGALVL TGRCYEQESV PYKAVDSLID ALTRYLLGDE EACAAVLGEG AVHGVGAELD
ALAVLSRLFP VLRRLPAVDA AADSLAHTSE LRVMRQQAFA ALRRLLGRLA EYRPLIVYID
DLHWGDGDSA ALLAELLAPP DPPPLLLLAA YRSEYAETSE CLRALGASAL ARGSAMTPGA
SGVAAGDLHR GELVVEPLGA EHARELAAQL LAIHGLRASE SDLDEQGGDL RVEWIARASR
GSALYVHELV RHLAGGRDLS TLSEQGLDHV LWLRISELAA PVRRLIEILA VAGQPVKLRQ
AQQVAELGAV PQRVLRDLRL GNLVRSSGPG LDDDIECFHD RVRESVLAHL QPEQLSGYHL
ALAQMFESGG EADPETIAAH YLAAGDAPRA CRYYEDAAAS ALDSLAFDRA EAFYSLAVEL
AADDDTRVRL CEQRIHFYTD MARFDDAYAC AREGLKLLGV KLPKGFVPPL FAADFAKASL
RLRGRDIAGL VELPTMRDAR REAAVRLMSA VAKAAYQIRP ELCVAVATKI VNLCLAHGNT
AECAIGYMVF GAIFQGGVLG RHRVGYDFGQ LALALIERFG NHRLRAEVSF VVGYFGTSWL
RPASEAEALW RVAYDSGVAT GDLFHTGCAA CCLVLGQLMR GAPIDEILAS AEAVQPDLSR
AGLRIPLGAI AAVRQTVRNL RDQTAGPVSL SDEGFDEAAL VAELPSWGIR HFEHFYYLCK
MALTYLRGTP AQALVAAERA APFRKESRGM LHGAEHGFWL GLIAAAGYQH APARKLLRTV
RDEHAALSKL AEQCPENFAA KAQLVAAELS RCRGRALEAL AGYAQCARLA GDSQQLQVEA
LACARAASLL AADASAAQAA GESAATWRER ARVAWRRWGA DPDVLARPGG APSESDA
|
|---|
| |