Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1563 |
Symbol | |
ID | 8543945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2132189 |
End bp | 2133250 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646386272 |
Product | Peptidase M23 |
Protein accession | YP_003266007 |
Protein GI | 262194798 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000282199 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAACA AAACATACAG AATCGTATCC TGCGGTGGCC TGGCCATCAC CTTCGCGGCG GCCGCGCTGC TGAGCGGTTG CCAGATGAGC GACGAGCTCG AGGGCGAAGA GATCGCGTTC AGCGAGCCCG CCGTCGAGGT CTACGGACAG ACGCCGGAGT TTGTGGAGGG CGCTGGCGAT GACACCTTGC GGGCGCTGGT CGAGACCGAG TCGACGAGCT GGGTGTATCC CTTCAATCCG ACGAGCTGGA CCATCGGTTT CAATATCTAC AATGGCTACC TGTCGTCGTG GAGCTCGTGC TTCCAGACCT CGATGAGCAA CCTCAAGCAC GCGGGTCAGG ACTGGGCCGG CAGCTCGACC CAGGTCGTCG CCGCCATCGG CGACGGCACC GTGGTCTACG CCGCCAACGC CAACTATCCC GGCTACGTGG TGGTGATCGA GCACGCGCTC AGCTCGGCCG AGCGCTCGGC CCTGGGCATC AGCAGCTCGT ATATCTACTC GATGTACGGC CACCTCGATG CGCCCTACGT CGGCGTGGGC AACACCGTGA GCGCGGGCCA GGCCATCGGC GATCTGTATT ATCAGGGCTC GAATACCCAC CTGCACTGGG AGGTGCGCAC CTTCGATATC TCGACGCTGT GCGCGACCTG GTACCCGGGC CCGGGCTACA CCGGCCCCGG CACCAACGCC ACCAGCTACG GCTACATGCA CCCGAGCAAC AGCGTGGCCG CGCTGCAGGG CGCGGGCAAC GGCGGCGGCA GCGGCTGCAC CTGCTATGAT GGCCTCGACT TCAATCGCCG CCAGGTCGAT CCCGCGGACA CGCACTGCGG CTTCCGCGTG TGCGGCACCA CGTACACCCT GTTCGAGTGC GGTACTGGCG GCTGGACCAA CCTCAACGCC TCGTGCGGCG GCGGCTGCAC CTGCTACGAG GGCATCGACT CCAGCGGTCG CGCGGTCGAC CCGGCAGACA CGCACTGCGG CTATCGCGTG TGTGGTCTCG ACAATCAGTA TTACGACTGC CAGAACGGCG GCTGGGTCGG CTCGGCGGAA AGCTGCCAGT AA
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Protein sequence | MLNKTYRIVS CGGLAITFAA AALLSGCQMS DELEGEEIAF SEPAVEVYGQ TPEFVEGAGD DTLRALVETE STSWVYPFNP TSWTIGFNIY NGYLSSWSSC FQTSMSNLKH AGQDWAGSST QVVAAIGDGT VVYAANANYP GYVVVIEHAL SSAERSALGI SSSYIYSMYG HLDAPYVGVG NTVSAGQAIG DLYYQGSNTH LHWEVRTFDI STLCATWYPG PGYTGPGTNA TSYGYMHPSN SVAALQGAGN GGGSGCTCYD GLDFNRRQVD PADTHCGFRV CGTTYTLFEC GTGGWTNLNA SCGGGCTCYE GIDSSGRAVD PADTHCGYRV CGLDNQYYDC QNGGWVGSAE SCQ
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