| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1560 |
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| Symbol | |
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| ID | 8543942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2127714 |
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| End bp | 2128646 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646386269 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003266004 |
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| Protein GI | 262194795 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.26307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTCC AGGCCATTCG CGCGTTCGTG CACACCGTCG AGCTGGGCAG TTTCGCGGCC
GTGGCCCGCG CCGAGCGCGT ATCGCCCTCG AGCATTTCGC GCCTGGTCAG CGAGCTCGAA
ACCGAGCTGT GCGTGCGCCT GTTTCAACGC ACCACGCGCC GGCTCAGCCT CACCGAAGCC
GGACGCGTGT ACCTCGACCG AGTCGCGCCG CTGCTCGAGG AGCTGGAGCG CGCGCGCGAT
CTGGCGCGCG AACTCAGCGC CACGCCGCGC GGCGTGTTGC GCGTGGCCTG CGCGCCGACC
TTCGCCCAGA TGCATCTGGC GCGCTGGCTG CCGAGCTTCT TGCAGCGCTA TCCCGAGCTG
GATGTCGAGC TGGTGCTCGA GGTCGGCGTC ACCGATCTGA TCGCCGCGCG CATCGACGTC
GCCCTGCGTC TCGGACGCGT GGACGGCGCC ACCCTGGTCG CCAAGAAGCT GTGCGAGATG
CCGCGCGTGG TGGTGGCCAG TCCGCAGTGG CTGGACGGGC GGCGGCTGCG CCCCGCGGAC
GTGAGCCGCG AGCCGTGCCT GGTGTTTGCC CACGCCGGCG TGGCGCCGCT GTGGCGCTTT
CGCGACCGAC GCGCGCGCGT GCGCGAATAT GCCCCGCGGC AACGCGTGCT CGCGCCCGAT
GGCGTGGTGC TGCGCCGCCT GGCCGTGGCC GGCCTCGGTC TCGCCCTGCT GGCGCGCTGG
GCGTGCGCCG AGGAGCTCGC CAGCGGTGCC CTGGTCGACG TCTTCCCCCG GCACGCGGTC
ACGGCCACCG AGTTCGACGC CGCCGTGTAC TGCGTGTATC CCTCGCGCAG CTATCTGCCG
CTGAAAGTGC GCCTGTTCGT CGATTTCGTC ACCGAGATCT TCCGCGACGG GCCGCCCTGG
ACGCAGCAGC AGCCGTCGTG CATCGGCGGC TAA
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| Protein sequence | MHLQAIRAFV HTVELGSFAA VARAERVSPS SISRLVSELE TELCVRLFQR TTRRLSLTEA
GRVYLDRVAP LLEELERARD LARELSATPR GVLRVACAPT FAQMHLARWL PSFLQRYPEL
DVELVLEVGV TDLIAARIDV ALRLGRVDGA TLVAKKLCEM PRVVVASPQW LDGRRLRPAD
VSREPCLVFA HAGVAPLWRF RDRRARVREY APRQRVLAPD GVVLRRLAVA GLGLALLARW
ACAEELASGA LVDVFPRHAV TATEFDAAVY CVYPSRSYLP LKVRLFVDFV TEIFRDGPPW
TQQQPSCIGG
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