| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1551 |
|---|
| Symbol | |
|---|
| ID | 8543933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2114531 |
|---|
| End bp | 2117149 |
|---|
| Gene Length | 2619 bp |
|---|
| Protein Length | 872 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646386261 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003265996 |
|---|
| Protein GI | 262194787 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.966824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT ACCCTCCCTA CATCATCCGC AACGCCGACG ATGCGGTCAC CAGCGAGGAC
TGGAATCGTC TGCAGGAGCT CATTCGCGAA GAGATCCGGC AGCACGGGCA CGGCGGCGAG
AGCGCCGACA GCAATCGCCT CGGACCGCTC GGCGCCAGAC TTGGCAACGA GAGCCTGGCC
GAGGGCGCCG TGGACGAAGC GGCGTTTGCC GACGGCGCAG TCACTACCCG CACATTGCAG
GAGCAGTTTC TCGGCGACCA AGATGTGGCC GCGGACGCGG CCATCTCCGA GAAGGAGCAC
CTGATCTTCG ACAGCGAGGG CGGCCACGAT CACGACGGCG TGAACAGCAG TCCGCTCGCG
GCTCAGTGCG TCGCGGCCGA GCAACTGGTC GACGGTGCGG TCACAGAGGA CAAGTTGTCC
GAAGACCTGC TGAGCGAGAT CATCGAGCTT GAACAAATCC TGGCCATCCC ACAGGTTCTG
TCGGTGGGCT CTGCGCCGGG CAGCTCGCAG CAGGGCGAGT CCTTTGTCGA TATCGTGGGC
CACGGTTTTG GCACCACGGC CGGTGAGGTG CGGCTGCTCA AGGTCGCGCC GGGGGCACCG
GGCGAGTATC AACTCGCCGA TATGCTGAGC ATCGAGAACT GGGAGCCCAA CCGGATTCGC
GTGCGTCTGC CCGAAGACCC CACCGGGTTG TTTCAGGTCG TGGTGAACGA TTTGCCGCTC
AACGCCGTGG TCTTCAACGA GGCTCTGACC GTGGTTAGGA CCATGCCGCT CGAGGGCACG
CTGACCGTGC CTGAGGGCAT CTTGATCGAG ATCGAGATGT CGACCGAGCT CATGATCGAT
CCCGCCACCG TCGACGATGA CCGCGGGCCG ACGCCCCTGG TTCTGTACCC GGGCGAGTCC
AGCCCGCGGC CGCTGGTGCA AGAGCTGCGC GAGGAGCCCC CGTATCTCGA GCAGCCCCTT
GAGATCTACT ACGGTGACCA GGTCACCCGC ATGGATGGCG AGATTCGCCT GTCGAGTGAC
CGCAAGACTC TCACCTTCAG CGCGGTGGGC AACGCCTACC CATTCGATGC GTCGGTGCTG
GTCAAGCTCT ACAGCGCAGG CGATATCGGA CGTAAGCCCG TCCTGCTGGC AGATAACACC
GAGACCGCCA TGGACGGCGC CGCCTTCGAA TTGCGCTGCC GCATCCGCAA GCAGCCGCCG
AAGGCGCCGG GGAAGATCAC GATTCGCGGG GCCCGTGGCA AGGACAACAT CGTGCTGGCG
CCGGAGAACA TGATCAGCCT GGCGAATCAT CACGCCGTAC CCGTCCAGAT CGCGCTGCAT
GAGGGCGCGC TGCCCTCGGA GTGGGTTCTG GTCACGCTCG ACGACGGAGT CAACGAGGTG
AGCGAGAAGG TGCCTGCGCT GGGCGATGCC GACGATCTCG TGTACGTGTC GCTGGACGCG
CGCGCGCTCC AGGACGGACA AATACAGATC ACCGCGGTGG CGCAGAATAC CACCAGCAGC
AGCCCGGAGA CACAGATCGC GGCGCTGGAT CCGCGCACCG GCGAGCCTGT TGACTGGGTT
TTGAAGGACA CCAAGATTCC CTATGTGCGC GTTCACCCGG TGCGCACGCC AACCCAGTTC
GACACGCAGT CGATGGTCAT CGATGTCGAG CCCGGGTCCA CACTTACGAT CGCGGGCGGC
GCGCGGCCGG TGGTCGTCAC CGATACCGCG TACAAGGGGC GCGTCGCCGT GGAGGTGCCG
CTCAACCCCA ACACCTCGAA CCGGCTCCGG GTCGTGGCCG TGGATCCGGC CGGGAACCGC
AGCGGGTCGA TCGCGACTGA CCGCGAGCAA ACGCCGCTGG TGGTGGTGCA CGACGACACC
CTCCCCGAGA TCACGGTCGC GCCGGTGCGC ACGCCCACGA ATCAGCGCAT CATCGAGATC
ACCGGCAGCG CCAACGAGCC GGTGACCGTG GTTGCGACCT CGGGCGGGAC CATCGCCAGC
GATACCGCCA ATCCCAACAA GAACTTCCGC ATTCGATTCA CACTGGCCGC GAACCAGCAG
AACATCATCA AGCTGGTGGC AACGGATGTC GCCGGCAATA GCTCGCCGTC GGTGACGCTG
CGCATCACTC ACGATGATCG ACCGCCCCCG CTCGTGCTCC GGCCTTCGGC TAAGTATTCG
CTCGCGCGCG GCGACTCGCC CACACCGTCG ATTACGACCA CGCGTACGAG AATCACTCTG
TACGGACAGA GCGAGCCCGG GGCCACGGTC ACACTCACCG GGCATGGGTA CCGCACCAGC
ACGCGGGCCG GTGCGGACGG CCGCTTCGCC ACGACCCTGC CGTTTCGCCT GATGCCGCGC
AACGTCCATG ACCGTGCGGA GAACCGGTCA TGGAAATTCA CTCTCGACGC CGTGGACCCC
AGCGGCAACG CCACCAAGCA GCAGAAAACC ATCTCCGTGC ACCTGCACTA CCGCATCCCG
GATGGGGTGC ACAGACACTG GCACTTCTAC TGGTGGCATT GGCGATGGTA CCCGCATTAC
GTGGTGCGTC GCAGTCGACT GCATCGCTTC TGGTGGTGGA CCACGAGAGT GTTCTGGTGG
GAGCGCTTTG ATTTCTCCGG CTGGCTGGCG CGCCTCTGA
|
|---|
| Protein sequence | MEKYPPYIIR NADDAVTSED WNRLQELIRE EIRQHGHGGE SADSNRLGPL GARLGNESLA
EGAVDEAAFA DGAVTTRTLQ EQFLGDQDVA ADAAISEKEH LIFDSEGGHD HDGVNSSPLA
AQCVAAEQLV DGAVTEDKLS EDLLSEIIEL EQILAIPQVL SVGSAPGSSQ QGESFVDIVG
HGFGTTAGEV RLLKVAPGAP GEYQLADMLS IENWEPNRIR VRLPEDPTGL FQVVVNDLPL
NAVVFNEALT VVRTMPLEGT LTVPEGILIE IEMSTELMID PATVDDDRGP TPLVLYPGES
SPRPLVQELR EEPPYLEQPL EIYYGDQVTR MDGEIRLSSD RKTLTFSAVG NAYPFDASVL
VKLYSAGDIG RKPVLLADNT ETAMDGAAFE LRCRIRKQPP KAPGKITIRG ARGKDNIVLA
PENMISLANH HAVPVQIALH EGALPSEWVL VTLDDGVNEV SEKVPALGDA DDLVYVSLDA
RALQDGQIQI TAVAQNTTSS SPETQIAALD PRTGEPVDWV LKDTKIPYVR VHPVRTPTQF
DTQSMVIDVE PGSTLTIAGG ARPVVVTDTA YKGRVAVEVP LNPNTSNRLR VVAVDPAGNR
SGSIATDREQ TPLVVVHDDT LPEITVAPVR TPTNQRIIEI TGSANEPVTV VATSGGTIAS
DTANPNKNFR IRFTLAANQQ NIIKLVATDV AGNSSPSVTL RITHDDRPPP LVLRPSAKYS
LARGDSPTPS ITTTRTRITL YGQSEPGATV TLTGHGYRTS TRAGADGRFA TTLPFRLMPR
NVHDRAENRS WKFTLDAVDP SGNATKQQKT ISVHLHYRIP DGVHRHWHFY WWHWRWYPHY
VVRRSRLHRF WWWTTRVFWW ERFDFSGWLA RL
|
|---|
| |