Gene Hoch_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1440 
Symbol 
ID8543822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1951600 
End bp1952022 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content69% 
IMG OID646386152 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003265887 
Protein GI262194678 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.462332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGT CGGTGGAACT CCTCCATGCC ATCAGTGAAC TGTCCGACGC CCTCGGCGAG 
AAGATGAGCG ACGTCGTCGC CGCGGGCAAG CTCACGGCCT CGCAGTTCAA CCTGCTCTAC
GATCTCGAGC ACGAGGGTCC GATGCGCCTG GGCGAGCTCG CCCGCTTTCG CCGATGCGTC
AAATCGAACG TGTCCAACCT GGTGCGCGGC ATGGAGCGAG ACGGCCTGGT CGAACTCAAG
GCCTCGCCCG AGGATCGACG CGCTCGCGTC GTCAGTCCCA GCGCGCTCGG CCGGCGTCGA
TTGCGCGCCG CCCTGCGCGT CGGCAACCAG CTCGAGCGCG GTCTGCGCGA CTCCCTGGGC
GAGGCGCGCG CGCAGCGACT GCGCAAGCTG TGCCTGGACG CGGCCGCGAT CCTCGACGAA
TGA
 
Protein sequence
MTPSVELLHA ISELSDALGE KMSDVVAAGK LTASQFNLLY DLEHEGPMRL GELARFRRCV 
KSNVSNLVRG MERDGLVELK ASPEDRRARV VSPSALGRRR LRAALRVGNQ LERGLRDSLG
EARAQRLRKL CLDAAAILDE